Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
IFT140Q96RY7 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC7.84□□□□□ -1.15
IFT140Q96RY7 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
IFT140Q96RY7 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
IFT140Q96RY7 ST7-212ENST00000422922 1887 ntTSL 5 BASIC7.84□□□□□ -1.15
IFT140Q96RY7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
IFT140Q96RY7 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
IFT140Q96RY7 AL591135.1-201ENST00000401578 5914 ntBASIC7.84□□□□□ -1.15
IFT140Q96RY7 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
IFT140Q96RY7 TRAV35-201ENST00000390462 330 ntBASIC7.84□□□□□ -1.15
IFT140Q96RY7 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
IFT140Q96RY7 OR1F12-201ENST00000402365 945 ntBASIC7.84□□□□□ -1.15
IFT140Q96RY7 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.84□□□□□ -1.15
IFT140Q96RY7 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC7.84□□□□□ -1.15
IFT140Q96RY7 RN7SL517P-201ENST00000462240 305 ntBASIC7.84□□□□□ -1.15
IFT140Q96RY7 NIFKP7-201ENST00000503365 834 ntBASIC7.84□□□□□ -1.15
IFT140Q96RY7 AC108475.1-201ENST00000507880 950 ntBASIC7.84□□□□□ -1.15
IFT140Q96RY7 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC7.84□□□□□ -1.15
IFT140Q96RY7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC7.84□□□□□ -1.15
IFT140Q96RY7 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
IFT140Q96RY7 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC7.84□□□□□ -1.15
IFT140Q96RY7 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
IFT140Q96RY7 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
IFT140Q96RY7 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
IFT140Q96RY7 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
IFT140Q96RY7 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
IFT140Q96RY7 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
IFT140Q96RY7 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
IFT140Q96RY7 SOCS5P3-201ENST00000425115 1576 ntBASIC7.84□□□□□ -1.15
IFT140Q96RY7 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC7.83□□□□□ -1.16
IFT140Q96RY7 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
IFT140Q96RY7 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
IFT140Q96RY7 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
IFT140Q96RY7 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
IFT140Q96RY7 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.83□□□□□ -1.16
IFT140Q96RY7 MIR372-201ENST00000362225 67 ntBASIC7.83□□□□□ -1.16
IFT140Q96RY7 AL672167.2-201ENST00000377164 879 ntBASIC7.83□□□□□ -1.16
IFT140Q96RY7 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.83□□□□□ -1.16
IFT140Q96RY7 AC073052.1-201ENST00000440417 714 ntBASIC7.83□□□□□ -1.16
IFT140Q96RY7 RPS7P7-201ENST00000463499 571 ntBASIC7.83□□□□□ -1.16
IFT140Q96RY7 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC7.83□□□□□ -1.16
IFT140Q96RY7 AC025164.1-201ENST00000496249 478 ntBASIC7.83□□□□□ -1.16
IFT140Q96RY7 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC7.83□□□□□ -1.16
IFT140Q96RY7 OR8Q1P-201ENST00000526467 655 ntBASIC7.83□□□□□ -1.16
IFT140Q96RY7 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
IFT140Q96RY7 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC7.83□□□□□ -1.16
IFT140Q96RY7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
IFT140Q96RY7 AC022884.2-201ENST00000578535 580 ntBASIC7.83□□□□□ -1.16
IFT140Q96RY7 AP001357.1-201ENST00000586304 1053 ntBASIC7.83□□□□□ -1.16
IFT140Q96RY7 AC091979.2-201ENST00000607514 214 ntBASIC7.83□□□□□ -1.16
IFT140Q96RY7 AC090506.2-201ENST00000624521 419 ntBASIC7.83□□□□□ -1.16
IFT140Q96RY7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC7.83□□□□□ -1.16
IFT140Q96RY7 AC090017.1-201ENST00000548612 1779 ntBASIC7.83□□□□□ -1.16
IFT140Q96RY7 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
IFT140Q96RY7 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
IFT140Q96RY7 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
IFT140Q96RY7 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
IFT140Q96RY7 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
IFT140Q96RY7 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
IFT140Q96RY7 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
IFT140Q96RY7 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
IFT140Q96RY7 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC7.82□□□□□ -1.16
IFT140Q96RY7 TEX41-206ENST00000432608 661 ntTSL 3 BASIC7.82□□□□□ -1.16
IFT140Q96RY7 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC7.82□□□□□ -1.16
IFT140Q96RY7 RPS27AP16-201ENST00000492222 470 ntBASIC7.82□□□□□ -1.16
IFT140Q96RY7 DSTNP2-201ENST00000504533 515 ntBASIC7.82□□□□□ -1.16
IFT140Q96RY7 Y_RNA.719-201ENST00000517156 106 ntBASIC7.82□□□□□ -1.16
IFT140Q96RY7 RN7SL703P-201ENST00000578485 302 ntBASIC7.82□□□□□ -1.16
IFT140Q96RY7 AP001160.4-201ENST00000596971 382 ntBASIC7.82□□□□□ -1.16
IFT140Q96RY7 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
IFT140Q96RY7 AC024220.1-201ENST00000603675 484 ntBASIC7.82□□□□□ -1.16
IFT140Q96RY7 AP003400.2-201ENST00000624036 666 ntBASIC7.82□□□□□ -1.16
IFT140Q96RY7 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.82□□□□□ -1.16
IFT140Q96RY7 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC7.82□□□□□ -1.16
IFT140Q96RY7 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.82□□□□□ -1.16
IFT140Q96RY7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC7.82□□□□□ -1.16
IFT140Q96RY7 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
IFT140Q96RY7 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
IFT140Q96RY7 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
IFT140Q96RY7 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC7.81□□□□□ -1.16
IFT140Q96RY7 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
IFT140Q96RY7 MIR383-201ENST00000362257 73 ntBASIC7.81□□□□□ -1.16
IFT140Q96RY7 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC7.81□□□□□ -1.16
IFT140Q96RY7 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC7.81□□□□□ -1.16
IFT140Q96RY7 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC7.81□□□□□ -1.16
IFT140Q96RY7 SNORA74C-1-201ENST00000580726 201 ntBASIC7.81□□□□□ -1.16
IFT140Q96RY7 AC018695.5-201ENST00000605872 315 ntBASIC7.81□□□□□ -1.16
IFT140Q96RY7 OR7A19P-201ENST00000608051 733 ntBASIC7.81□□□□□ -1.16
IFT140Q96RY7 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
IFT140Q96RY7 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
IFT140Q96RY7 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC7.81□□□□□ -1.16
IFT140Q96RY7 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
IFT140Q96RY7 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.81□□□□□ -1.16
IFT140Q96RY7 FTO-203ENST00000460382 1517 ntTSL 5 BASIC7.81□□□□□ -1.16
IFT140Q96RY7 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
IFT140Q96RY7 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.81□□□□□ -1.16
IFT140Q96RY7 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
IFT140Q96RY7 AL627171.1-201ENST00000618845 1308 ntBASIC7.81□□□□□ -1.16
IFT140Q96RY7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
IFT140Q96RY7 AC106871.1-201ENST00000568324 3102 ntBASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms