Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC005017.1-201ENST00000482002 490 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AC073610.1-201ENST00000489971 396 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AC091965.3-201ENST00000506236 208 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AC093281.2-201ENST00000510153 597 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 NPM1P6-201ENST00000521088 871 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AC084337.1-201ENST00000524809 686 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 OR7K1P-201ENST00000546439 926 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AC074029.1-201ENST00000552531 1044 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 ZNF519P3-201ENST00000557158 1032 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 CYCSP1-201ENST00000604815 315 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AL513218.1-201ENST00000606527 391 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AC080013.4-201ENST00000607624 649 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 RNU6-84P-201ENST00000607737 102 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AL365181.4-201ENST00000609800 547 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 MIR6889-201ENST00000613185 59 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 OR11H2-202ENST00000641517 1085 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AL121936.2-201ENST00000641935 662 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AC008957.3-201ENST00000624112 2242 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AL359091.1-201ENST00000449048 1734 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 SAGE3P-201ENST00000619800 1635 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 SNORD35A-201ENST00000363389 86 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 PRELID1P1-201ENST00000403549 660 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AL023284.3-201ENST00000407767 334 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 MRPS21P3-201ENST00000436696 262 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 COX4I1P2-201ENST00000447446 547 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 DNAJC19P1-201ENST00000455312 319 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 CDC42P3-201ENST00000518493 633 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AC025881.1-201ENST00000518851 512 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AP003033.2-201ENST00000528901 805 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 RPS3AP4-201ENST00000555161 764 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AC092325.1-201ENST00000566449 554 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 MT1CP-201ENST00000567054 174 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 MIR4719-201ENST00000585233 84 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AC011500.1-201ENST00000601963 469 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AL390838.2-201ENST00000602394 274 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AC133552.5-201ENST00000604266 540 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 LARP7P1-201ENST00000605576 316 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AC091946.2-201ENST00000606105 291 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AL359314.1-201ENST00000616913 261 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AL445670.1-201ENST00000618889 801 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AC012414.7-202ENST00000622705 1090 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AL122023.1-201ENST00000622847 530 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AL132640.3-201ENST00000630473 177 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 CR848007.1-201ENST00000442354 1699 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AL359976.1-201ENST00000418655 3528 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AP002370.1-201ENST00000528055 1602 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 AC006213.6-201ENST00000623722 4179 ntBASIC6.07□□□□□ -1.44
PTCHD1Q96NR3 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC010624.4-201ENST00000597606 1351 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 AC074141.1-201ENST00000588129 2995 ntBASIC6.06□□□□□ -1.44
PTCHD1Q96NR3 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms