Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
C9orf72Q96LT7 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
C9orf72Q96LT7 AC083843.2-201ENST00000568248 6253 ntBASIC5.06□□□□□ -1.6
C9orf72Q96LT7 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
C9orf72Q96LT7 MIR550A3-201ENST00000390735 95 ntBASIC5.06□□□□□ -1.6
C9orf72Q96LT7 AL133270.1-201ENST00000402635 279 ntBASIC5.06□□□□□ -1.6
C9orf72Q96LT7 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.06□□□□□ -1.6
C9orf72Q96LT7 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.06□□□□□ -1.6
C9orf72Q96LT7 EIF4A1P1-201ENST00000420241 934 ntBASIC5.06□□□□□ -1.6
C9orf72Q96LT7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
C9orf72Q96LT7 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.06□□□□□ -1.6
C9orf72Q96LT7 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.06□□□□□ -1.6
C9orf72Q96LT7 RPS29P9-201ENST00000440360 171 ntBASIC5.06□□□□□ -1.6
C9orf72Q96LT7 AC092647.3-201ENST00000443044 633 ntBASIC5.06□□□□□ -1.6
C9orf72Q96LT7 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.06□□□□□ -1.6
C9orf72Q96LT7 AC020890.1-201ENST00000491837 504 ntBASIC5.06□□□□□ -1.6
C9orf72Q96LT7 AC010350.1-201ENST00000504908 231 ntBASIC5.06□□□□□ -1.6
C9orf72Q96LT7 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.06□□□□□ -1.6
C9orf72Q96LT7 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.06□□□□□ -1.6
C9orf72Q96LT7 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.06□□□□□ -1.6
C9orf72Q96LT7 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.06□□□□□ -1.6
C9orf72Q96LT7 AC104687.2-201ENST00000604442 342 ntBASIC5.06□□□□□ -1.6
C9orf72Q96LT7 CASC19-281ENST00000642118 1554 ntBASIC5.06□□□□□ -1.6
C9orf72Q96LT7 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
C9orf72Q96LT7 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.06□□□□□ -1.6
C9orf72Q96LT7 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
C9orf72Q96LT7 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
C9orf72Q96LT7 CASC19-206ENST00000641028 1430 ntBASIC5.06□□□□□ -1.6
C9orf72Q96LT7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 AL929601.4-201ENST00000613011 1341 ntBASIC5.05□□□□□ -1.6
C9orf72Q96LT7 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 AC008549.2-201ENST00000333482 706 ntBASIC5.05□□□□□ -1.6
C9orf72Q96LT7 RNU4-4P-201ENST00000364588 130 ntBASIC5.05□□□□□ -1.6
C9orf72Q96LT7 AL592291.1-201ENST00000403830 352 ntBASIC5.05□□□□□ -1.6
C9orf72Q96LT7 RN7SKP114-201ENST00000410327 279 ntBASIC5.05□□□□□ -1.6
C9orf72Q96LT7 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 RGS17P1-201ENST00000423358 553 ntBASIC5.05□□□□□ -1.6
C9orf72Q96LT7 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.05□□□□□ -1.6
C9orf72Q96LT7 EIF4HP2-201ENST00000424380 563 ntBASIC5.05□□□□□ -1.6
C9orf72Q96LT7 AL590762.4-201ENST00000425885 253 ntBASIC5.05□□□□□ -1.6
C9orf72Q96LT7 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 SCAND3P1-201ENST00000439854 1060 ntBASIC5.05□□□□□ -1.6
C9orf72Q96LT7 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 RPL7P61-201ENST00000451721 751 ntBASIC5.05□□□□□ -1.6
C9orf72Q96LT7 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 NDUFB5P1-201ENST00000508134 564 ntBASIC5.05□□□□□ -1.6
C9orf72Q96LT7 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 AC074140.1-201ENST00000621617 208 ntBASIC5.05□□□□□ -1.6
C9orf72Q96LT7 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 AC112255.1-201ENST00000624070 2493 ntBASIC5.05□□□□□ -1.6
C9orf72Q96LT7 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.05□□□□□ -1.6
C9orf72Q96LT7 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
C9orf72Q96LT7 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
C9orf72Q96LT7 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
C9orf72Q96LT7 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
C9orf72Q96LT7 AC133552.1-201ENST00000569988 4007 ntBASIC5.04□□□□□ -1.6
C9orf72Q96LT7 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.04□□□□□ -1.6
C9orf72Q96LT7 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.04□□□□□ -1.6
C9orf72Q96LT7 DDX18P5-201ENST00000534547 1306 ntBASIC5.04□□□□□ -1.6
C9orf72Q96LT7 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.04□□□□□ -1.6
C9orf72Q96LT7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
C9orf72Q96LT7 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
C9orf72Q96LT7 ATP5HP3-201ENST00000396994 486 ntBASIC5.04□□□□□ -1.6
C9orf72Q96LT7 CHMP1B2P-201ENST00000399581 597 ntBASIC5.04□□□□□ -1.6
C9orf72Q96LT7 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.04□□□□□ -1.6
C9orf72Q96LT7 AL356968.2-201ENST00000412769 1257 ntBASIC5.04□□□□□ -1.6
C9orf72Q96LT7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.04□□□□□ -1.6
C9orf72Q96LT7 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.04□□□□□ -1.6
C9orf72Q96LT7 ARAFP2-201ENST00000440565 559 ntBASIC5.04□□□□□ -1.6
C9orf72Q96LT7 TCEA1P1-201ENST00000449716 880 ntBASIC5.04□□□□□ -1.6
C9orf72Q96LT7 AC092647.2-201ENST00000452998 253 ntBASIC5.04□□□□□ -1.6
C9orf72Q96LT7 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.04□□□□□ -1.6
C9orf72Q96LT7 AC073358.1-201ENST00000505671 684 ntBASIC5.04□□□□□ -1.6
C9orf72Q96LT7 RFPL4AP5-201ENST00000514977 504 ntBASIC5.04□□□□□ -1.6
C9orf72Q96LT7 RN7SKP46-201ENST00000515942 234 ntBASIC5.04□□□□□ -1.6
C9orf72Q96LT7 RN7SKP147-201ENST00000517154 244 ntBASIC5.04□□□□□ -1.6
C9orf72Q96LT7 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.04□□□□□ -1.6
C9orf72Q96LT7 AC026688.1-201ENST00000520639 1168 ntBASIC5.04□□□□□ -1.6
C9orf72Q96LT7 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.04□□□□□ -1.6
C9orf72Q96LT7 AP002373.2-201ENST00000541631 1060 ntBASIC5.04□□□□□ -1.6
C9orf72Q96LT7 AC008126.1-201ENST00000549019 480 ntBASIC5.04□□□□□ -1.6
C9orf72Q96LT7 AP002884.5-201ENST00000595053 1132 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms