Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 HSPD1P11-201ENST00000508643 1702 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 Z93019.1-201ENST00000416450 973 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 MTCYBP12-201ENST00000440559 1134 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AC069540.1-201ENST00000446320 988 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AL009048.1-201ENST00000450437 298 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AC144530.1-201ENST00000452862 555 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 PPIAP19-201ENST00000486414 492 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AC107398.1-201ENST00000486904 505 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AC098862.1-201ENST00000504991 413 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 MTATP6P1-201ENST00000514057 681 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 SNORA19.3-201ENST00000516165 130 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AGGF1P5-201ENST00000567900 919 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AC002069.2-201ENST00000603580 883 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AC068313.1-201ENST00000604028 1008 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AL359513.1-201ENST00000614364 557 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AL118522.2-201ENST00000616045 615 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 CYCSP41-201ENST00000616920 296 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 uc_338.7-201ENST00000621834 124 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AL356863.1-201ENST00000623378 1080 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AC132068.1-201ENST00000623805 459 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AL691477.1-201ENST00000624398 162 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AC092451.3-201ENST00000625067 1343 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 MFSD8-213ENST00000641134 1327 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AL353796.1-201ENST00000561542 3241 ntBASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 ATP5HP3-201ENST00000396994 486 ntBASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 RNU4-74P-201ENST00000411280 161 ntBASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 Z68694.1-201ENST00000413929 841 ntBASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 GAPDHP34-201ENST00000432112 823 ntBASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 MTCYBP15-201ENST00000433123 1127 ntBASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 AC092447.2-201ENST00000435487 669 ntBASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 MTND1P26-201ENST00000440488 538 ntBASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 AC090602.1-201ENST00000469695 252 ntBASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 AC074087.1-201ENST00000512059 724 ntBASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 MTND6P2-201ENST00000512226 524 ntBASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 RNU6-276P-201ENST00000516114 96 ntBASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 NPM1P35-201ENST00000533043 868 ntBASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 AC022404.1-201ENST00000555320 273 ntBASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 MTATP6P24-201ENST00000576835 677 ntBASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 AL022067.1-201ENST00000602426 454 ntBASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 AC006363.1-201ENST00000603806 463 ntBASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 AC140725.3-201ENST00000616193 880 ntBASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 AL669942.2-201ENST00000620352 697 ntBASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 AC083865.1-201ENST00000636634 831 ntBASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDK5RAP3Q96JB5 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDK5RAP3Q96JB5 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms