Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RPS26P13-201ENST00000419030 330 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.4□□□□□ -1.38
ERCC4Q92889 AC090960.1-201ENST00000421072 306 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.4□□□□□ -1.38
ERCC4Q92889 GAPDHP34-201ENST00000432112 823 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 AC007679.3-201ENST00000434035 414 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.4□□□□□ -1.38
ERCC4Q92889 AL138899.2-201ENST00000439139 499 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 PTGES3P1-201ENST00000439531 483 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.4□□□□□ -1.38
ERCC4Q92889 RPS6P2-201ENST00000454208 705 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 RN7SL197P-201ENST00000466981 299 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.4□□□□□ -1.38
ERCC4Q92889 PFN1P8-201ENST00000497012 543 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 RPSAP51-201ENST00000497462 645 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.4□□□□□ -1.38
ERCC4Q92889 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC6.4□□□□□ -1.38
ERCC4Q92889 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC6.4□□□□□ -1.38
ERCC4Q92889 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.4□□□□□ -1.38
ERCC4Q92889 NDUFS5P6-201ENST00000529136 295 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.4□□□□□ -1.38
ERCC4Q92889 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.4□□□□□ -1.38
ERCC4Q92889 AC009852.2-201ENST00000567898 485 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.4□□□□□ -1.38
ERCC4Q92889 AC134669.1-201ENST00000581275 672 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ERCC4Q92889 SUMO2P14-201ENST00000604488 293 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC6.4□□□□□ -1.38
ERCC4Q92889 AL138478.1-201ENST00000612252 832 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ERCC4Q92889 AC138965.3-201ENST00000623875 498 ntBASIC6.4□□□□□ -1.38
ERCC4Q92889 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.4□□□□□ -1.38
ERCC4Q92889 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.4□□□□□ -1.38
ERCC4Q92889 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
ERCC4Q92889 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ERCC4Q92889 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.4□□□□□ -1.39
ERCC4Q92889 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.4□□□□□ -1.39
ERCC4Q92889 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
ERCC4Q92889 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.4□□□□□ -1.39
ERCC4Q92889 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
ERCC4Q92889 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
ERCC4Q92889 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
ERCC4Q92889 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
ERCC4Q92889 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
ERCC4Q92889 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
ERCC4Q92889 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC4Q92889 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.39□□□□□ -1.39
ERCC4Q92889 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC4Q92889 AL353796.1-201ENST00000561542 3241 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 AC006206.1-201ENST00000544842 3387 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC4Q92889 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
ERCC4Q92889 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC4Q92889 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC4Q92889 RNA5SP273-201ENST00000362484 113 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 RNU4-92P-201ENST00000363783 136 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 RN7SKP69-201ENST00000365390 305 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC4Q92889 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC4Q92889 SNORA70.6-201ENST00000383934 134 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 RNA5SP187-201ENST00000384400 119 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC4Q92889 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.39□□□□□ -1.39
ERCC4Q92889 RPL7P27-201ENST00000403775 720 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC6.39□□□□□ -1.39
ERCC4Q92889 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.39□□□□□ -1.39
ERCC4Q92889 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC4Q92889 AC005189.1-201ENST00000431286 310 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.39□□□□□ -1.39
ERCC4Q92889 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.39□□□□□ -1.39
ERCC4Q92889 SEPT14P24-201ENST00000447236 180 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC6.39□□□□□ -1.39
ERCC4Q92889 RPL7P45-201ENST00000455851 743 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 GTF2IP12-201ENST00000456547 356 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.39□□□□□ -1.39
ERCC4Q92889 RPS4XP6-201ENST00000477670 797 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 AC092865.4-201ENST00000477936 615 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 MTND2P14-201ENST00000482139 351 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 RN7SL57P-201ENST00000493687 290 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 RPS17P5-201ENST00000498293 408 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 AC092593.2-201ENST00000513866 913 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 IGLV3-24-201ENST00000517477 197 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 MTCO1P47-201ENST00000523889 1271 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.39□□□□□ -1.39
ERCC4Q92889 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.39□□□□□ -1.39
ERCC4Q92889 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.39□□□□□ -1.39
ERCC4Q92889 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC4Q92889 HSPE1P2-201ENST00000554777 306 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.39□□□□□ -1.39
ERCC4Q92889 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.39□□□□□ -1.39
ERCC4Q92889 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.39□□□□□ -1.39
ERCC4Q92889 MTCYBP33-201ENST00000575007 1130 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 RBM22P1-201ENST00000578589 1214 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.39□□□□□ -1.39
ERCC4Q92889 AC006272.2-201ENST00000594725 163 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.39□□□□□ -1.39
ERCC4Q92889 AP002906.1-201ENST00000603405 233 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 MIR6133-201ENST00000617057 108 ntBASIC6.39□□□□□ -1.39
ERCC4Q92889 AC010975.3-201ENST00000618727 978 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms