Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AC110602.1-201ENST00000437414 318 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 EEF1A1P39-201ENST00000440791 250 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 RPS7P5-201ENST00000441482 581 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 RHEBP2-201ENST00000450289 600 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 TPMTP4-201ENST00000450749 678 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AC005229.2-201ENST00000456995 399 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 ACA64.1-201ENST00000459171 127 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 snoU13.29-201ENST00000459370 104 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 RN7SL741P-201ENST00000482473 289 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AC073522.1-201ENST00000483312 377 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AC134050.1-201ENST00000495088 933 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AL035404.1-201ENST00000497982 568 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AC010285.3-201ENST00000511668 676 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 TOMM20P1-201ENST00000534518 427 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AC006530.1-201ENST00000555980 571 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AC107958.1-201ENST00000556576 290 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 NIFKP8-201ENST00000560500 874 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AC002487.1-201ENST00000604565 994 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AC006386.1-201ENST00000619436 415 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AL359955.1-201ENST00000455242 3275 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AC138393.1-206ENST00000540997 1886 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 GVINP1-202ENST00000531871 7271 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 AC006042.3-201ENST00000454684 1469 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 CIR1P2-201ENST00000514821 1342 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 RN7SKP78-201ENST00000364711 318 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 SUGT1P2-201ENST00000379452 992 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 RNU6-77P-201ENST00000410554 91 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 RN7SKP17-201ENST00000411242 351 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 AL596448.1-201ENST00000415024 392 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 RPL21P110-201ENST00000433345 446 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 HMGB1P45-201ENST00000435986 653 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 UBE2V1P5-201ENST00000440070 405 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 BX248409.1-201ENST00000455497 255 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 RPL23AP71-201ENST00000470966 469 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 AL161747.1-201ENST00000480068 358 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 MTCO3P35-201ENST00000485582 781 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 PDCL3P4-201ENST00000489621 720 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 AC005912.1-201ENST00000495392 255 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 AC082651.2-201ENST00000496833 166 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 AC098799.3-201ENST00000506095 438 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 AC105384.2-201ENST00000508433 640 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 PRELID3BP5-201ENST00000508612 460 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 COX6B1P6-201ENST00000522347 255 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.59□□□□□ -1.51
KRT78Q8N1N4 MTCO3P15-201ENST00000526563 574 ntBASIC5.59□□□□□ -1.51
KRT78Q8N1N4 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms