Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC6.98□□□□□ -1.29
NPAS4Q8IUM7 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
NPAS4Q8IUM7 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
NPAS4Q8IUM7 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 Y_RNA.302-201ENST00000364997 102 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 ATP5F1P4-201ENST00000397288 746 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 EI24P3-201ENST00000399046 1062 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 NCSTNP1-201ENST00000406229 144 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 RNU2-65P-201ENST00000410162 185 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 PIGPP2-201ENST00000411569 458 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AC112492.2-201ENST00000432774 1030 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 RPS26P40-201ENST00000435209 294 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AP000936.3-201ENST00000438127 255 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 RPL21P71-201ENST00000465598 459 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AC079841.1-201ENST00000481228 950 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 OR7E99P-201ENST00000505750 922 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 KHDC1P1-201ENST00000511053 508 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 TRIM77BP-201ENST00000524985 1119 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 OR5G4P-201ENST00000525251 760 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AC138915.4-201ENST00000565549 4147 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 MRPS21P8-201ENST00000569196 235 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 RN7SL475P-201ENST00000583379 298 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AC008507.3-201ENST00000585753 472 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AC083899.3-201ENST00000603413 594 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AL391497.1-201ENST00000608671 547 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AC106028.5-201ENST00000610332 395 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AC092266.1-201ENST00000610958 165 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 U6atac.1-201ENST00000616025 117 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 FAM27E2-201ENST00000619668 403 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AC009120.7-201ENST00000623452 780 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AL008636.1-201ENST00000625038 1018 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AL589993.1-201ENST00000407450 2524 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 OR5BR1P-201ENST00000524992 1330 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AC119674.1-204ENST00000641348 1343 ntBASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.97□□□□□ -1.29
NPAS4Q8IUM7 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
NPAS4Q8IUM7 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
NPAS4Q8IUM7 TRIM51GP-201ENST00000534741 1350 ntBASIC6.96□□□□□ -1.29
NPAS4Q8IUM7 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
NPAS4Q8IUM7 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
NPAS4Q8IUM7 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
NPAS4Q8IUM7 MAPK10-383ENST00000642032 3390 ntBASIC6.96□□□□□ -1.29
NPAS4Q8IUM7 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.96□□□□□ -1.29
NPAS4Q8IUM7 AC027575.3-201ENST00000583058 2747 ntBASIC6.96□□□□□ -1.29
NPAS4Q8IUM7 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
NPAS4Q8IUM7 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.96□□□□□ -1.29
NPAS4Q8IUM7 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
NPAS4Q8IUM7 CASC19-204ENST00000641001 2055 ntBASIC6.96□□□□□ -1.29
NPAS4Q8IUM7 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
NPAS4Q8IUM7 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.96□□□□□ -1.3
NPAS4Q8IUM7 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
NPAS4Q8IUM7 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
NPAS4Q8IUM7 RNU4-21P-201ENST00000362802 126 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms