Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 RN7SKP145-201ENST00000363291 303 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 RNU6-792P-201ENST00000363490 107 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 OR7E101P-201ENST00000400428 513 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 RN7SKP213-201ENST00000410746 298 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 OR5M12P-201ENST00000423388 929 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 UBE2D3P3-201ENST00000426992 425 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 MRPL50P1-201ENST00000431951 384 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AL512661.1-201ENST00000434586 1253 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AL450263.2-201ENST00000439400 589 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 Z80107.2-201ENST00000445127 392 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AL354710.1-201ENST00000453641 246 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AL157777.1-201ENST00000468100 304 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AL122020.1-201ENST00000472287 459 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 NAMPTP2-201ENST00000505629 1115 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 SEPT10P1-201ENST00000517342 1162 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 HIGD1AP18-201ENST00000520730 278 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 OR4A17P-201ENST00000526032 904 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 GARSP1-201ENST00000570895 719 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AP005119.1-201ENST00000580956 292 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 DNAJC19P3-201ENST00000594491 331 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AC084373.1-201ENST00000603311 235 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AL136131.3-201ENST00000607600 188 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 MIR378J-201ENST00000611988 109 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AC090617.9-201ENST00000623751 147 ntBASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.65□□□□□ -1.67
PDLIM3Q53GG5 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 AP004607.3-201ENST00000530354 3915 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 AC092681.1-201ENST00000297369 291 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 MIR16-2-201ENST00000362117 81 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 RN7SKP124-201ENST00000364730 341 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 SNORA70.6-201ENST00000383934 134 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 MIR223-201ENST00000385204 110 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 MT-TP-201ENST00000387461 68 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 AC096921.1-201ENST00000411661 375 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 AL354692.1-201ENST00000423044 315 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 AL139148.1-201ENST00000427122 680 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 VN1R54P-201ENST00000435210 1049 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 AC006466.1-201ENST00000438721 289 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 CEACAMP9-201ENST00000442990 513 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 LINC02210-201ENST00000444561 288 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 TPT1P13-201ENST00000449760 499 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 RN7SL269P-201ENST00000467795 305 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 RPS29P22-201ENST00000472363 168 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 RPL7P6-201ENST00000480903 738 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 UBA52P7-201ENST00000486088 380 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 AC007686.1-201ENST00000488511 463 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 RPL15P21-201ENST00000495592 567 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 AC010374.2-201ENST00000512933 535 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 NPM1P35-201ENST00000533043 868 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 AC137627.1-201ENST00000545761 289 ntBASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.64□□□□□ -1.67
PDLIM3Q53GG5 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms