Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RBMY2QP-201ENST00000429799 1147 ntBASIC4.41□□□□□ -1.7
H3F3AP84243 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.41□□□□□ -1.7
H3F3AP84243 PTMAP6-201ENST00000439110 327 ntBASIC4.41□□□□□ -1.7
H3F3AP84243 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.41□□□□□ -1.7
H3F3AP84243 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.41□□□□□ -1.7
H3F3AP84243 AL356981.1-201ENST00000454879 684 ntBASIC4.41□□□□□ -1.7
H3F3AP84243 AP000942.1-201ENST00000463969 747 ntBASIC4.41□□□□□ -1.7
H3F3AP84243 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.41□□□□□ -1.7
H3F3AP84243 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.41□□□□□ -1.7
H3F3AP84243 AC110775.1-201ENST00000513721 462 ntBASIC4.41□□□□□ -1.7
H3F3AP84243 RNA5SP392-201ENST00000516905 112 ntBASIC4.41□□□□□ -1.7
H3F3AP84243 Y_RNA.719-201ENST00000517156 106 ntBASIC4.41□□□□□ -1.7
H3F3AP84243 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.41□□□□□ -1.7
H3F3AP84243 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
H3F3AP84243 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.41□□□□□ -1.7
H3F3AP84243 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.41□□□□□ -1.7
H3F3AP84243 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.41□□□□□ -1.7
H3F3AP84243 AC133644.2-201ENST00000608142 540 ntBASIC4.41□□□□□ -1.7
H3F3AP84243 AC211433.2-201ENST00000608433 387 ntBASIC4.41□□□□□ -1.7
H3F3AP84243 CR381572.2-201ENST00000624852 397 ntBASIC4.41□□□□□ -1.7
H3F3AP84243 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
H3F3AP84243 MIPEPP2-201ENST00000422560 1819 ntBASIC4.41□□□□□ -1.7
H3F3AP84243 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
H3F3AP84243 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.41□□□□□ -1.7
H3F3AP84243 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.41□□□□□ -1.7
H3F3AP84243 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
H3F3AP84243 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.41□□□□□ -1.7
H3F3AP84243 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
H3F3AP84243 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
H3F3AP84243 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
H3F3AP84243 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
H3F3AP84243 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
H3F3AP84243 CASC19-255ENST00000641733 1385 ntBASIC4.4□□□□□ -1.7
H3F3AP84243 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
H3F3AP84243 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
H3F3AP84243 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
H3F3AP84243 AC100778.3-201ENST00000580060 1750 ntBASIC4.4□□□□□ -1.7
H3F3AP84243 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.4□□□□□ -1.7
H3F3AP84243 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.4□□□□□ -1.7
H3F3AP84243 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
H3F3AP84243 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.4□□□□□ -1.7
H3F3AP84243 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
H3F3AP84243 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
H3F3AP84243 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
H3F3AP84243 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
H3F3AP84243 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
H3F3AP84243 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
H3F3AP84243 HMGB3P7-201ENST00000400214 611 ntBASIC4.4□□□□□ -1.71
H3F3AP84243 AL589647.1-201ENST00000402485 466 ntBASIC4.4□□□□□ -1.71
H3F3AP84243 RPL10P10-201ENST00000403509 664 ntBASIC4.4□□□□□ -1.71
H3F3AP84243 GTF2IP5-201ENST00000414608 731 ntBASIC4.4□□□□□ -1.71
H3F3AP84243 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.4□□□□□ -1.71
H3F3AP84243 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.4□□□□□ -1.71
H3F3AP84243 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.4□□□□□ -1.71
H3F3AP84243 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.4□□□□□ -1.71
H3F3AP84243 AC073052.1-201ENST00000440417 714 ntBASIC4.4□□□□□ -1.71
H3F3AP84243 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.4□□□□□ -1.71
H3F3AP84243 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.4□□□□□ -1.71
H3F3AP84243 AL157385.1-201ENST00000446973 268 ntBASIC4.4□□□□□ -1.71
H3F3AP84243 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.4□□□□□ -1.71
H3F3AP84243 RPL23AP56-201ENST00000460778 453 ntBASIC4.4□□□□□ -1.71
H3F3AP84243 AL591473.1-201ENST00000464297 313 ntBASIC4.4□□□□□ -1.71
H3F3AP84243 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.4□□□□□ -1.71
H3F3AP84243 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.4□□□□□ -1.71
H3F3AP84243 GAPDHP56-201ENST00000506031 988 ntBASIC4.4□□□□□ -1.71
H3F3AP84243 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
H3F3AP84243 BTG4P1-201ENST00000510421 183 ntBASIC4.4□□□□□ -1.71
H3F3AP84243 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.4□□□□□ -1.71
H3F3AP84243 RFPL4AP5-201ENST00000514977 504 ntBASIC4.4□□□□□ -1.71
H3F3AP84243 MIR4646-201ENST00000580775 63 ntBASIC4.4□□□□□ -1.71
H3F3AP84243 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.4□□□□□ -1.71
H3F3AP84243 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.4□□□□□ -1.71
H3F3AP84243 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.4□□□□□ -1.71
H3F3AP84243 AC011487.3-201ENST00000593607 453 ntBASIC4.4□□□□□ -1.71
H3F3AP84243 AC243960.7-201ENST00000623532 707 ntBASIC4.4□□□□□ -1.71
H3F3AP84243 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.4□□□□□ -1.71
H3F3AP84243 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
H3F3AP84243 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
H3F3AP84243 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
H3F3AP84243 CR383656.5-201ENST00000547616 1340 ntBASIC4.4□□□□□ -1.71
H3F3AP84243 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
H3F3AP84243 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
H3F3AP84243 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.4□□□□□ -1.71
H3F3AP84243 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.4□□□□□ -1.71
H3F3AP84243 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
H3F3AP84243 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
H3F3AP84243 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
H3F3AP84243 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.39□□□□□ -1.71
H3F3AP84243 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
H3F3AP84243 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.39□□□□□ -1.71
H3F3AP84243 MIR137-201ENST00000385223 102 ntBASIC4.39□□□□□ -1.71
H3F3AP84243 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.39□□□□□ -1.71
H3F3AP84243 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.39□□□□□ -1.71
H3F3AP84243 VN1R54P-201ENST00000435210 1049 ntBASIC4.39□□□□□ -1.71
H3F3AP84243 AC092447.2-201ENST00000435487 669 ntBASIC4.39□□□□□ -1.71
H3F3AP84243 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.39□□□□□ -1.71
H3F3AP84243 AL136455.1-201ENST00000441083 1240 ntBASIC4.39□□□□□ -1.71
H3F3AP84243 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.39□□□□□ -1.71
H3F3AP84243 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.39□□□□□ -1.71
H3F3AP84243 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms