Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TPM4P67936 AC015813.6-201ENST00000624409 5808 ntBASIC5.39□□□□□ -1.55
TPM4P67936 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.39□□□□□ -1.55
TPM4P67936 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TPM4P67936 TMSB4XP4-201ENST00000323496 618 ntBASIC5.39□□□□□ -1.55
TPM4P67936 SNORD96B-201ENST00000386148 79 ntBASIC5.39□□□□□ -1.55
TPM4P67936 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TPM4P67936 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.39□□□□□ -1.55
TPM4P67936 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.39□□□□□ -1.55
TPM4P67936 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.39□□□□□ -1.55
TPM4P67936 RPS27AP2-201ENST00000457576 465 ntBASIC5.39□□□□□ -1.55
TPM4P67936 AC104849.1-201ENST00000462623 405 ntBASIC5.39□□□□□ -1.55
TPM4P67936 RN7SL244P-201ENST00000493405 297 ntBASIC5.39□□□□□ -1.55
TPM4P67936 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.39□□□□□ -1.55
TPM4P67936 AC024405.1-201ENST00000532521 1042 ntBASIC5.39□□□□□ -1.55
TPM4P67936 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.39□□□□□ -1.55
TPM4P67936 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TPM4P67936 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.39□□□□□ -1.55
TPM4P67936 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.39□□□□□ -1.55
TPM4P67936 AC005726.4-201ENST00000582858 458 ntBASIC5.39□□□□□ -1.55
TPM4P67936 RNA5SP440-201ENST00000612665 119 ntBASIC5.39□□□□□ -1.55
TPM4P67936 AC099494.2-201ENST00000623371 978 ntBASIC5.39□□□□□ -1.55
TPM4P67936 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TPM4P67936 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.39□□□□□ -1.55
TPM4P67936 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.39□□□□□ -1.55
TPM4P67936 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.39□□□□□ -1.55
TPM4P67936 AC007382.1-201ENST00000624376 2618 ntBASIC5.39□□□□□ -1.55
TPM4P67936 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TPM4P67936 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TPM4P67936 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TPM4P67936 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
TPM4P67936 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TPM4P67936 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TPM4P67936 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TPM4P67936 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TPM4P67936 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.38□□□□□ -1.55
TPM4P67936 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TPM4P67936 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TPM4P67936 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TPM4P67936 RN7SKP293-201ENST00000411389 296 ntBASIC5.38□□□□□ -1.55
TPM4P67936 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.38□□□□□ -1.55
TPM4P67936 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.38□□□□□ -1.55
TPM4P67936 TMX2P1-201ENST00000436507 708 ntBASIC5.38□□□□□ -1.55
TPM4P67936 AL161636.2-201ENST00000445179 927 ntBASIC5.38□□□□□ -1.55
TPM4P67936 TDGF1P1-201ENST00000445734 527 ntBASIC5.38□□□□□ -1.55
TPM4P67936 RPL23AP65-201ENST00000475608 468 ntBASIC5.38□□□□□ -1.55
TPM4P67936 RN7SL41P-201ENST00000476144 297 ntBASIC5.38□□□□□ -1.55
TPM4P67936 AC090142.2-201ENST00000483263 416 ntBASIC5.38□□□□□ -1.55
TPM4P67936 AC116562.1-201ENST00000485355 781 ntBASIC5.38□□□□□ -1.55
TPM4P67936 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.38□□□□□ -1.55
TPM4P67936 AP002373.2-201ENST00000541631 1060 ntBASIC5.38□□□□□ -1.55
TPM4P67936 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.38□□□□□ -1.55
TPM4P67936 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.38□□□□□ -1.55
TPM4P67936 AP000919.1-201ENST00000582850 985 ntBASIC5.38□□□□□ -1.55
TPM4P67936 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.38□□□□□ -1.55
TPM4P67936 AC004232.3-201ENST00000622977 525 ntBASIC5.38□□□□□ -1.55
TPM4P67936 AC011815.3-201ENST00000624194 473 ntBASIC5.38□□□□□ -1.55
TPM4P67936 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TPM4P67936 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.38□□□□□ -1.55
TPM4P67936 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.38□□□□□ -1.55
TPM4P67936 AL121950.1-201ENST00000624993 2077 ntBASIC5.38□□□□□ -1.55
TPM4P67936 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TPM4P67936 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TPM4P67936 RNU1-43P-201ENST00000365052 165 ntBASIC5.37□□□□□ -1.55
TPM4P67936 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TPM4P67936 MIR195-201ENST00000385194 87 ntBASIC5.37□□□□□ -1.55
TPM4P67936 RNA5SP372-201ENST00000390836 115 ntBASIC5.37□□□□□ -1.55
TPM4P67936 AL121834.1-202ENST00000404494 277 ntBASIC5.37□□□□□ -1.55
TPM4P67936 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.37□□□□□ -1.55
TPM4P67936 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.37□□□□□ -1.55
TPM4P67936 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.37□□□□□ -1.55
TPM4P67936 OR2X1P-201ENST00000421144 687 ntBASIC5.37□□□□□ -1.55
TPM4P67936 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.37□□□□□ -1.55
TPM4P67936 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.37□□□□□ -1.55
TPM4P67936 AC073109.1-201ENST00000445066 978 ntBASIC5.37□□□□□ -1.55
TPM4P67936 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.37□□□□□ -1.55
TPM4P67936 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TPM4P67936 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.37□□□□□ -1.55
TPM4P67936 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.37□□□□□ -1.55
TPM4P67936 RN7SL97P-201ENST00000486780 299 ntBASIC5.37□□□□□ -1.55
TPM4P67936 RN7SL184P-201ENST00000488308 297 ntBASIC5.37□□□□□ -1.55
TPM4P67936 COX6B1P5-201ENST00000509843 249 ntBASIC5.37□□□□□ -1.55
TPM4P67936 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.37□□□□□ -1.55
TPM4P67936 RFPL4AP3-201ENST00000515267 345 ntBASIC5.37□□□□□ -1.55
TPM4P67936 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.37□□□□□ -1.55
TPM4P67936 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.37□□□□□ -1.55
TPM4P67936 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.37□□□□□ -1.55
TPM4P67936 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.37□□□□□ -1.55
TPM4P67936 OR7E128P-201ENST00000532736 1024 ntBASIC5.37□□□□□ -1.55
TPM4P67936 CYCSP28-201ENST00000534284 321 ntBASIC5.37□□□□□ -1.55
TPM4P67936 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.37□□□□□ -1.55
TPM4P67936 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.37□□□□□ -1.55
TPM4P67936 AC007204.2-201ENST00000615022 616 ntBASIC5.37□□□□□ -1.55
TPM4P67936 AL353662.3-201ENST00000625131 237 ntBASIC5.37□□□□□ -1.55
TPM4P67936 AC136428.4-201ENST00000634254 1155 ntBASIC5.37□□□□□ -1.55
TPM4P67936 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TPM4P67936 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
TPM4P67936 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TPM4P67936 AC091046.3-201ENST00000631455 1574 ntBASIC5.37□□□□□ -1.55
TPM4P67936 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms