Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.57□□□□□ -1.84
CKS1BP61024 AC005297.1-201ENST00000444765 862 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 AL354714.3-201ENST00000447284 493 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 BTF3P6-201ENST00000448054 499 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC3.57□□□□□ -1.84
CKS1BP61024 AL451050.1-201ENST00000450126 415 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 HIGD1AP8-201ENST00000453927 274 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 AP000547.1-201ENST00000454360 617 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 AP000926.1-201ENST00000479573 241 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 AC090686.1-201ENST00000481577 749 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 RPL7P40-201ENST00000481703 745 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.57□□□□□ -1.84
CKS1BP61024 AC025445.1-201ENST00000502728 300 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC3.57□□□□□ -1.84
CKS1BP61024 AC025458.1-201ENST00000506046 166 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 AL592156.1-201ENST00000508758 304 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC3.57□□□□□ -1.84
CKS1BP61024 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.57□□□□□ -1.84
CKS1BP61024 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.57□□□□□ -1.84
CKS1BP61024 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC3.57□□□□□ -1.84
CKS1BP61024 IGKV2D-23-201ENST00000518179 286 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 MRPS16P1-201ENST00000523462 412 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC3.57□□□□□ -1.84
CKS1BP61024 AL121839.1-201ENST00000556233 1185 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.57□□□□□ -1.84
CKS1BP61024 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC3.57□□□□□ -1.84
CKS1BP61024 AC015802.2-201ENST00000589690 189 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC3.57□□□□□ -1.84
CKS1BP61024 AC023421.1-201ENST00000590535 1785 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CKS1BP61024 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC3.57□□□□□ -1.84
CKS1BP61024 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CKS1BP61024 AC005252.1-201ENST00000604518 1063 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC3.57□□□□□ -1.84
CKS1BP61024 AL365181.4-201ENST00000609800 547 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.57□□□□□ -1.84
CKS1BP61024 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CKS1BP61024 AC074276.2-201ENST00000619891 348 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 AC073592.6-201ENST00000624271 415 ntBASIC3.57□□□□□ -1.84
CKS1BP61024 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CKS1BP61024 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
CKS1BP61024 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CKS1BP61024 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.57□□□□□ -1.84
CKS1BP61024 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.56□□□□□ -1.84
CKS1BP61024 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CKS1BP61024 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CKS1BP61024 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CKS1BP61024 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CKS1BP61024 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CKS1BP61024 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.56□□□□□ -1.84
CKS1BP61024 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CKS1BP61024 AC114786.1-201ENST00000512892 1415 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC3.56□□□□□ -1.84
CKS1BP61024 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CKS1BP61024 AC007685.1-201ENST00000329806 452 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 RNA5SP273-201ENST00000362484 113 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 RNA5SP477-201ENST00000362639 119 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 RNA5SP131-201ENST00000365452 119 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 AC004386.1-201ENST00000393214 761 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 MORN2-202ENST00000409077 465 ntTSL 5 BASIC3.56□□□□□ -1.84
CKS1BP61024 RN7SKP177-201ENST00000410567 355 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.56□□□□□ -1.84
CKS1BP61024 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 AC115283.1-201ENST00000427353 400 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 BX323845.3-201ENST00000428215 527 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 AC069154.1-201ENST00000432914 542 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 AL161722.2-201ENST00000434731 981 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 NPM1P48-201ENST00000436002 853 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 OR6D1P-201ENST00000436165 939 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.56□□□□□ -1.84
CKS1BP61024 ELOCP10-201ENST00000440624 327 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC3.56□□□□□ -1.84
CKS1BP61024 EXTL2P1-201ENST00000446218 416 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC3.56□□□□□ -1.84
CKS1BP61024 RPL7P31-201ENST00000450192 724 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 LRRC37A14P-201ENST00000452297 462 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 OR52E7P-201ENST00000452394 933 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 VDAC2P4-201ENST00000452925 711 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 AL354710.1-201ENST00000453641 246 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 AL133477.1-201ENST00000457472 514 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 RN7SL189P-201ENST00000468631 289 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.56□□□□□ -1.84
CKS1BP61024 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.56□□□□□ -1.84
CKS1BP61024 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
CKS1BP61024 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.56□□□□□ -1.84
CKS1BP61024 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC3.56□□□□□ -1.84
CKS1BP61024 UGT2A3P7-201ENST00000510485 734 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 AC114781.3-201ENST00000512083 142 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC3.56□□□□□ -1.84
CKS1BP61024 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC3.56□□□□□ -1.84
CKS1BP61024 TRIM77BP-201ENST00000524985 1119 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CKS1BP61024 OR11H3P-201ENST00000554547 982 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC3.56□□□□□ -1.84
CKS1BP61024 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC3.56□□□□□ -1.84
CKS1BP61024 AC022884.2-201ENST00000578535 580 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CKS1BP61024 AC060766.1-201ENST00000590824 627 ntBASIC3.56□□□□□ -1.84
CKS1BP61024 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
CKS1BP61024 AP000769.2-201ENST00000602344 396 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms