Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN6P56747 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CLDN6P56747 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN6P56747 MTND2P17-201ENST00000550281 688 ntBASIC4.82□□□□□ -1.64
CLDN6P56747 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN6P56747 MIR4715-201ENST00000584117 79 ntBASIC4.82□□□□□ -1.64
CLDN6P56747 AC020910.2-201ENST00000603635 610 ntBASIC4.82□□□□□ -1.64
CLDN6P56747 AL161912.3-201ENST00000605404 628 ntBASIC4.82□□□□□ -1.64
CLDN6P56747 AL121873.1-201ENST00000616013 524 ntBASIC4.82□□□□□ -1.64
CLDN6P56747 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN6P56747 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.82□□□□□ -1.64
CLDN6P56747 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN6P56747 AP003072.5-201ENST00000623872 773 ntBASIC4.82□□□□□ -1.64
CLDN6P56747 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN6P56747 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.82□□□□□ -1.64
CLDN6P56747 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN6P56747 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.82□□□□□ -1.64
CLDN6P56747 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN6P56747 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN6P56747 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN6P56747 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN6P56747 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN6P56747 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN6P56747 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN6P56747 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CLDN6P56747 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN6P56747 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN6P56747 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN6P56747 OR9G4-201ENST00000302957 984 ntBASIC4.81□□□□□ -1.64
CLDN6P56747 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN6P56747 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN6P56747 SNORA70.10-201ENST00000384515 134 ntBASIC4.81□□□□□ -1.64
CLDN6P56747 Z97832.1-201ENST00000402490 328 ntBASIC4.81□□□□□ -1.64
CLDN6P56747 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN6P56747 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN6P56747 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN6P56747 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN6P56747 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN6P56747 OR7E125P-201ENST00000443450 846 ntBASIC4.81□□□□□ -1.64
CLDN6P56747 AC234781.3-201ENST00000452540 973 ntBASIC4.81□□□□□ -1.64
CLDN6P56747 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN6P56747 AC011005.3-201ENST00000491624 395 ntBASIC4.81□□□□□ -1.64
CLDN6P56747 AK3P4-201ENST00000504283 583 ntBASIC4.81□□□□□ -1.64
CLDN6P56747 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN6P56747 RNU6-943P-201ENST00000516960 98 ntBASIC4.81□□□□□ -1.64
CLDN6P56747 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.81□□□□□ -1.64
CLDN6P56747 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN6P56747 TOMM20P2-201ENST00000540082 421 ntBASIC4.81□□□□□ -1.64
CLDN6P56747 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN6P56747 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.81□□□□□ -1.64
CLDN6P56747 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.81□□□□□ -1.64
CLDN6P56747 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN6P56747 AC020915.5-201ENST00000596836 964 ntBASIC4.81□□□□□ -1.64
CLDN6P56747 MIR6830-201ENST00000636015 70 ntBASIC4.81□□□□□ -1.64
CLDN6P56747 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN6P56747 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.81□□□□□ -1.64
CLDN6P56747 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CLDN6P56747 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
CLDN6P56747 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN6P56747 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CLDN6P56747 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN6P56747 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.81□□□□□ -1.64
CLDN6P56747 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN6P56747 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CLDN6P56747 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
CLDN6P56747 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLDN6P56747 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
CLDN6P56747 ZNF652P1-201ENST00000442420 1309 ntBASIC4.8□□□□□ -1.64
CLDN6P56747 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN6P56747 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN6P56747 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CLDN6P56747 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN6P56747 AL450345.1-202ENST00000605741 3881 ntBASIC4.8□□□□□ -1.64
CLDN6P56747 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN6P56747 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN6P56747 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN6P56747 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
CLDN6P56747 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN6P56747 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLDN6P56747 AL021331.1-201ENST00000402817 582 ntBASIC4.8□□□□□ -1.64
CLDN6P56747 AC012519.1-201ENST00000424588 610 ntBASIC4.8□□□□□ -1.64
CLDN6P56747 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN6P56747 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN6P56747 AC013356.1-201ENST00000489027 564 ntBASIC4.8□□□□□ -1.64
CLDN6P56747 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN6P56747 AC021193.1-201ENST00000511607 420 ntBASIC4.8□□□□□ -1.64
CLDN6P56747 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN6P56747 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN6P56747 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN6P56747 AC005377.1-201ENST00000605126 456 ntBASIC4.8□□□□□ -1.64
CLDN6P56747 MLECP1-201ENST00000615893 709 ntBASIC4.8□□□□□ -1.64
CLDN6P56747 MIR6853-201ENST00000619642 74 ntBASIC4.8□□□□□ -1.64
CLDN6P56747 uc_338.7-201ENST00000621834 124 ntBASIC4.8□□□□□ -1.64
CLDN6P56747 AC021106.3-201ENST00000623925 531 ntBASIC4.8□□□□□ -1.64
CLDN6P56747 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN6P56747 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN6P56747 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN6P56747 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN6P56747 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN6P56747 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms