Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.58□□□□□ -1.52
CLCN3P51790 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.58□□□□□ -1.52
CLCN3P51790 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLCN3P51790 HMGB1P47-201ENST00000511281 589 ntBASIC5.58□□□□□ -1.52
CLCN3P51790 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.58□□□□□ -1.52
CLCN3P51790 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.58□□□□□ -1.52
CLCN3P51790 EIF1P5-201ENST00000585002 234 ntBASIC5.58□□□□□ -1.52
CLCN3P51790 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.58□□□□□ -1.52
CLCN3P51790 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.58□□□□□ -1.52
CLCN3P51790 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.58□□□□□ -1.52
CLCN3P51790 AP004372.1-201ENST00000604842 844 ntBASIC5.58□□□□□ -1.52
CLCN3P51790 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLCN3P51790 RMST_5.1-201ENST00000618704 126 ntBASIC5.58□□□□□ -1.52
CLCN3P51790 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLCN3P51790 AL133370.2-201ENST00000619934 439 ntBASIC5.58□□□□□ -1.52
CLCN3P51790 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.58□□□□□ -1.52
CLCN3P51790 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLCN3P51790 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLCN3P51790 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.58□□□□□ -1.52
CLCN3P51790 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CLCN3P51790 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.58□□□□□ -1.52
CLCN3P51790 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLCN3P51790 AC068446.1-201ENST00000556425 1549 ntBASIC5.58□□□□□ -1.52
CLCN3P51790 AC132825.1-201ENST00000463573 2247 ntBASIC5.58□□□□□ -1.52
CLCN3P51790 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CLCN3P51790 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLCN3P51790 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.57□□□□□ -1.52
CLCN3P51790 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLCN3P51790 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLCN3P51790 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.57□□□□□ -1.52
CLCN3P51790 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLCN3P51790 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CLCN3P51790 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.57□□□□□ -1.52
CLCN3P51790 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.57□□□□□ -1.52
CLCN3P51790 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.57□□□□□ -1.52
CLCN3P51790 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.57□□□□□ -1.52
CLCN3P51790 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
CLCN3P51790 RN7SKP149-201ENST00000363008 344 ntBASIC5.57□□□□□ -1.52
CLCN3P51790 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CLCN3P51790 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLCN3P51790 GAPDHP15-201ENST00000398586 975 ntBASIC5.57□□□□□ -1.52
CLCN3P51790 GLUD1P9-201ENST00000420997 1173 ntBASIC5.57□□□□□ -1.52
CLCN3P51790 AC013410.2-201ENST00000422627 201 ntBASIC5.57□□□□□ -1.52
CLCN3P51790 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.57□□□□□ -1.52
CLCN3P51790 AL354766.1-201ENST00000423396 542 ntBASIC5.57□□□□□ -1.52
CLCN3P51790 HSPD1P12-201ENST00000429127 1069 ntBASIC5.57□□□□□ -1.52
CLCN3P51790 AC008072.1-201ENST00000434254 824 ntBASIC5.57□□□□□ -1.52
CLCN3P51790 RPL7P11-201ENST00000437586 658 ntBASIC5.57□□□□□ -1.52
CLCN3P51790 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.57□□□□□ -1.52
CLCN3P51790 AC073648.4-201ENST00000442655 781 ntBASIC5.57□□□□□ -1.52
CLCN3P51790 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.57□□□□□ -1.52
CLCN3P51790 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.57□□□□□ -1.52
CLCN3P51790 AL157884.3-201ENST00000448273 1184 ntBASIC5.57□□□□□ -1.52
CLCN3P51790 MTND2P25-201ENST00000449028 610 ntBASIC5.57□□□□□ -1.52
CLCN3P51790 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.57□□□□□ -1.52
CLCN3P51790 FABP5P6-201ENST00000510588 409 ntBASIC5.57□□□□□ -1.52
CLCN3P51790 CDH12P4-201ENST00000517835 295 ntBASIC5.57□□□□□ -1.52
CLCN3P51790 CDH12P3-201ENST00000517935 295 ntBASIC5.57□□□□□ -1.52
CLCN3P51790 CDH12P1-201ENST00000518435 295 ntBASIC5.57□□□□□ -1.52
CLCN3P51790 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.57□□□□□ -1.52
CLCN3P51790 AP001804.2-201ENST00000533932 910 ntBASIC5.57□□□□□ -1.52
CLCN3P51790 AC092451.2-201ENST00000538746 658 ntBASIC5.57□□□□□ -1.52
CLCN3P51790 MTND2P13-201ENST00000577438 1039 ntBASIC5.57□□□□□ -1.52
CLCN3P51790 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.57□□□□□ -1.52
CLCN3P51790 AC105148.1-201ENST00000604961 409 ntBASIC5.57□□□□□ -1.52
CLCN3P51790 MIR6748-201ENST00000610433 71 ntBASIC5.57□□□□□ -1.52
CLCN3P51790 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
CLCN3P51790 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CLCN3P51790 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CLCN3P51790 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLCN3P51790 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.57□□□□□ -1.52
CLCN3P51790 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLCN3P51790 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLCN3P51790 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CLCN3P51790 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLCN3P51790 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
CLCN3P51790 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.57□□□□□ -1.52
CLCN3P51790 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLCN3P51790 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
CLCN3P51790 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CLCN3P51790 MTND5P23-201ENST00000430812 1655 ntBASIC5.56□□□□□ -1.52
CLCN3P51790 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLCN3P51790 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CLCN3P51790 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CLCN3P51790 AC010132.2-201ENST00000295493 1043 ntBASIC5.56□□□□□ -1.52
CLCN3P51790 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLCN3P51790 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLCN3P51790 SNORA70.10-201ENST00000384515 134 ntBASIC5.56□□□□□ -1.52
CLCN3P51790 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.56□□□□□ -1.52
CLCN3P51790 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLCN3P51790 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.56□□□□□ -1.52
CLCN3P51790 AC009238.2-201ENST00000431026 355 ntBASIC5.56□□□□□ -1.52
CLCN3P51790 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.56□□□□□ -1.52
CLCN3P51790 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.56□□□□□ -1.52
CLCN3P51790 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CLCN3P51790 BX842559.2-201ENST00000451418 605 ntBASIC5.56□□□□□ -1.52
CLCN3P51790 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.56□□□□□ -1.52
CLCN3P51790 AC091180.1-201ENST00000462104 372 ntBASIC5.56□□□□□ -1.52
CLCN3P51790 RPSAP51-201ENST00000497462 645 ntBASIC5.56□□□□□ -1.52
CLCN3P51790 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms