Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC7.02□□□□□ -1.29
USP11P51784 OR5D2P-201ENST00000524390 911 ntBASIC7.02□□□□□ -1.29
USP11P51784 AC130365.2-201ENST00000525882 1201 ntBASIC7.02□□□□□ -1.29
USP11P51784 MTCO3P15-201ENST00000526563 574 ntBASIC7.02□□□□□ -1.29
USP11P51784 AP003392.2-201ENST00000527269 208 ntBASIC7.02□□□□□ -1.29
USP11P51784 AP001646.1-201ENST00000527936 915 ntBASIC7.02□□□□□ -1.29
USP11P51784 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.02□□□□□ -1.29
USP11P51784 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC7.02□□□□□ -1.29
USP11P51784 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USP11P51784 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
USP11P51784 BGLT3-201ENST00000564523 994 ntBASIC7.02□□□□□ -1.29
USP11P51784 AC012435.1-202ENST00000568772 240 ntBASIC7.02□□□□□ -1.29
USP11P51784 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC7.02□□□□□ -1.29
USP11P51784 MIR4271-201ENST00000582451 67 ntBASIC7.02□□□□□ -1.29
USP11P51784 AP004372.1-201ENST00000604842 844 ntBASIC7.02□□□□□ -1.29
USP11P51784 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC7.02□□□□□ -1.29
USP11P51784 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USP11P51784 AC009120.7-201ENST00000623452 780 ntBASIC7.02□□□□□ -1.29
USP11P51784 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
USP11P51784 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
USP11P51784 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
USP11P51784 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC7.02□□□□□ -1.29
USP11P51784 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
USP11P51784 AP000776.1-201ENST00000530032 1663 ntBASIC7.02□□□□□ -1.29
USP11P51784 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USP11P51784 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
USP11P51784 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USP11P51784 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
USP11P51784 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.01□□□□□ -1.29
USP11P51784 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USP11P51784 HSPD1P9-201ENST00000420325 1636 ntBASIC7.01□□□□□ -1.29
USP11P51784 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
USP11P51784 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.01□□□□□ -1.29
USP11P51784 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USP11P51784 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USP11P51784 AC006511.3-201ENST00000624929 1783 ntBASIC7.01□□□□□ -1.29
USP11P51784 AC104966.1-201ENST00000467010 1464 ntBASIC7.01□□□□□ -1.29
USP11P51784 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USP11P51784 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.01□□□□□ -1.29
USP11P51784 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC7.01□□□□□ -1.29
USP11P51784 AC007562.1-201ENST00000421819 517 ntBASIC7.01□□□□□ -1.29
USP11P51784 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.01□□□□□ -1.29
USP11P51784 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC7.01□□□□□ -1.29
USP11P51784 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USP11P51784 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC7.01□□□□□ -1.29
USP11P51784 AL138899.2-201ENST00000439139 499 ntBASIC7.01□□□□□ -1.29
USP11P51784 MTND3P1-201ENST00000441336 220 ntBASIC7.01□□□□□ -1.29
USP11P51784 AC023274.2-201ENST00000445264 521 ntBASIC7.01□□□□□ -1.29
USP11P51784 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC7.01□□□□□ -1.29
USP11P51784 EEF1E1P1-201ENST00000446998 430 ntBASIC7.01□□□□□ -1.29
USP11P51784 AC114755.5-201ENST00000447760 831 ntBASIC7.01□□□□□ -1.29
USP11P51784 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
USP11P51784 AC002553.3-201ENST00000453002 341 ntBASIC7.01□□□□□ -1.29
USP11P51784 ATP5A1P7-201ENST00000453978 1279 ntBASIC7.01□□□□□ -1.29
USP11P51784 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.01□□□□□ -1.29
USP11P51784 RPL31P58-201ENST00000469001 379 ntBASIC7.01□□□□□ -1.29
USP11P51784 TSACC-207ENST00000470342 601 ntTSL 2 BASIC7.01□□□□□ -1.29
USP11P51784 AC011979.1-201ENST00000472300 483 ntBASIC7.01□□□□□ -1.29
USP11P51784 AC128716.1-201ENST00000475129 166 ntBASIC7.01□□□□□ -1.29
USP11P51784 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.01□□□□□ -1.29
USP11P51784 OR5H5P-201ENST00000503164 928 ntBASIC7.01□□□□□ -1.29
USP11P51784 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.01□□□□□ -1.29
USP11P51784 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC7.01□□□□□ -1.29
USP11P51784 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USP11P51784 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.01□□□□□ -1.29
USP11P51784 NPM1P6-201ENST00000521088 871 ntBASIC7.01□□□□□ -1.29
USP11P51784 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.01□□□□□ -1.29
USP11P51784 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7.01□□□□□ -1.29
USP11P51784 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC7.01□□□□□ -1.29
USP11P51784 AC006512.2-201ENST00000543250 486 ntBASIC7.01□□□□□ -1.29
USP11P51784 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC7.01□□□□□ -1.29
USP11P51784 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC7.01□□□□□ -1.29
USP11P51784 AC092332.1-201ENST00000563684 829 ntBASIC7.01□□□□□ -1.29
USP11P51784 OR4H6P-201ENST00000563771 921 ntBASIC7.01□□□□□ -1.29
USP11P51784 AC069545.1-201ENST00000605671 358 ntBASIC7.01□□□□□ -1.29
USP11P51784 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.01□□□□□ -1.29
USP11P51784 AL137067.2-201ENST00000621202 131 ntBASIC7.01□□□□□ -1.29
USP11P51784 AC073593.1-201ENST00000624500 411 ntBASIC7.01□□□□□ -1.29
USP11P51784 AC015726.3-201ENST00000624501 418 ntBASIC7.01□□□□□ -1.29
USP11P51784 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC7.01□□□□□ -1.29
USP11P51784 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC7.01□□□□□ -1.29
USP11P51784 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USP11P51784 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USP11P51784 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USP11P51784 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USP11P51784 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USP11P51784 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USP11P51784 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.01□□□□□ -1.29
USP11P51784 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USP11P51784 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC7.01□□□□□ -1.29
USP11P51784 AL137100.1-201ENST00000556703 1620 ntBASIC7.01□□□□□ -1.29
USP11P51784 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USP11P51784 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USP11P51784 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USP11P51784 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.01□□□□□ -1.29
USP11P51784 SAMMSON-210ENST00000641260 1308 ntBASIC7.01□□□□□ -1.29
USP11P51784 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USP11P51784 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7□□□□□ -1.29
USP11P51784 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7□□□□□ -1.29
USP11P51784 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms