Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
BRCC3P46736 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.25□□□□□ -1.57
BRCC3P46736 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.25□□□□□ -1.57
BRCC3P46736 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
BRCC3P46736 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.25□□□□□ -1.57
BRCC3P46736 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
BRCC3P46736 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
BRCC3P46736 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.24□□□□□ -1.57
BRCC3P46736 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
BRCC3P46736 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
BRCC3P46736 AC005005.4-201ENST00000623789 16698 ntBASIC5.24□□□□□ -1.57
BRCC3P46736 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.24□□□□□ -1.57
BRCC3P46736 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
BRCC3P46736 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
BRCC3P46736 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
BRCC3P46736 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.24□□□□□ -1.57
BRCC3P46736 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.24□□□□□ -1.57
BRCC3P46736 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
BRCC3P46736 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.24□□□□□ -1.57
BRCC3P46736 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
BRCC3P46736 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
BRCC3P46736 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
BRCC3P46736 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
BRCC3P46736 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
BRCC3P46736 MIR192-201ENST00000384915 110 ntBASIC5.24□□□□□ -1.57
BRCC3P46736 AL358178.1-201ENST00000407698 397 ntBASIC5.24□□□□□ -1.57
BRCC3P46736 RN7SKP16-201ENST00000410180 299 ntBASIC5.24□□□□□ -1.57
BRCC3P46736 RN7SKP100-201ENST00000411258 284 ntBASIC5.24□□□□□ -1.57
BRCC3P46736 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.24□□□□□ -1.57
BRCC3P46736 TRGV7-201ENST00000427089 353 ntBASIC5.24□□□□□ -1.57
BRCC3P46736 UBE2V2P1-201ENST00000434717 398 ntBASIC5.24□□□□□ -1.57
BRCC3P46736 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.24□□□□□ -1.57
BRCC3P46736 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.24□□□□□ -1.57
BRCC3P46736 AC011753.3-201ENST00000443436 406 ntBASIC5.24□□□□□ -1.57
BRCC3P46736 AC073264.2-201ENST00000448886 166 ntBASIC5.24□□□□□ -1.57
BRCC3P46736 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.24□□□□□ -1.57
BRCC3P46736 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.24□□□□□ -1.57
BRCC3P46736 CBX1P2-201ENST00000453841 458 ntBASIC5.24□□□□□ -1.57
BRCC3P46736 RN7SL459P-201ENST00000481078 302 ntBASIC5.24□□□□□ -1.57
BRCC3P46736 RPL23AP72-201ENST00000492447 435 ntBASIC5.24□□□□□ -1.57
BRCC3P46736 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.24□□□□□ -1.57
BRCC3P46736 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.24□□□□□ -1.57
BRCC3P46736 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.24□□□□□ -1.57
BRCC3P46736 RN7SKP276-201ENST00000516242 268 ntBASIC5.24□□□□□ -1.57
BRCC3P46736 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.24□□□□□ -1.57
BRCC3P46736 AC100784.1-201ENST00000522790 310 ntBASIC5.24□□□□□ -1.57
BRCC3P46736 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.24□□□□□ -1.57
BRCC3P46736 AC009852.2-201ENST00000567898 485 ntBASIC5.24□□□□□ -1.57
BRCC3P46736 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.24□□□□□ -1.57
BRCC3P46736 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.24□□□□□ -1.57
BRCC3P46736 AL512782.1-201ENST00000603093 364 ntBASIC5.24□□□□□ -1.57
BRCC3P46736 AC007497.1-201ENST00000610421 561 ntBASIC5.24□□□□□ -1.57
BRCC3P46736 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.24□□□□□ -1.57
BRCC3P46736 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
BRCC3P46736 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.24□□□□□ -1.57
BRCC3P46736 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
BRCC3P46736 AC006484.1-201ENST00000435086 1884 ntBASIC5.24□□□□□ -1.57
BRCC3P46736 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
BRCC3P46736 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
BRCC3P46736 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
BRCC3P46736 AC010928.1-201ENST00000592477 1447 ntBASIC5.23□□□□□ -1.57
BRCC3P46736 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
BRCC3P46736 AC004817.4-201ENST00000602396 3625 ntBASIC5.23□□□□□ -1.57
BRCC3P46736 AL603750.1-201ENST00000624216 1717 ntBASIC5.23□□□□□ -1.57
BRCC3P46736 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
BRCC3P46736 AC116158.1-201ENST00000560231 2129 ntBASIC5.23□□□□□ -1.57
BRCC3P46736 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
BRCC3P46736 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
BRCC3P46736 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.23□□□□□ -1.57
BRCC3P46736 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
BRCC3P46736 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
BRCC3P46736 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
BRCC3P46736 U3.30-201ENST00000391308 210 ntBASIC5.23□□□□□ -1.57
BRCC3P46736 RSU1P3-201ENST00000412878 835 ntBASIC5.23□□□□□ -1.57
BRCC3P46736 QRSL1P2-201ENST00000418582 964 ntBASIC5.23□□□□□ -1.57
BRCC3P46736 AL121878.1-201ENST00000418638 859 ntBASIC5.23□□□□□ -1.57
BRCC3P46736 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.23□□□□□ -1.57
BRCC3P46736 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.23□□□□□ -1.57
BRCC3P46736 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.23□□□□□ -1.57
BRCC3P46736 AC073052.1-201ENST00000440417 714 ntBASIC5.23□□□□□ -1.57
BRCC3P46736 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.23□□□□□ -1.57
BRCC3P46736 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.23□□□□□ -1.57
BRCC3P46736 AC006463.2-201ENST00000473326 348 ntBASIC5.23□□□□□ -1.57
BRCC3P46736 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.23□□□□□ -1.57
BRCC3P46736 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
BRCC3P46736 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.23□□□□□ -1.57
BRCC3P46736 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
BRCC3P46736 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.23□□□□□ -1.57
BRCC3P46736 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.23□□□□□ -1.57
BRCC3P46736 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.23□□□□□ -1.57
BRCC3P46736 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.23□□□□□ -1.57
BRCC3P46736 OR5AN2P-201ENST00000534535 896 ntBASIC5.23□□□□□ -1.57
BRCC3P46736 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.23□□□□□ -1.57
BRCC3P46736 AP006289.1-201ENST00000538089 277 ntBASIC5.23□□□□□ -1.57
BRCC3P46736 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.23□□□□□ -1.57
BRCC3P46736 AC006363.1-201ENST00000603806 463 ntBASIC5.23□□□□□ -1.57
BRCC3P46736 AC008745.1-201ENST00000604064 271 ntBASIC5.23□□□□□ -1.57
BRCC3P46736 AC087468.1-201ENST00000604365 630 ntBASIC5.23□□□□□ -1.57
BRCC3P46736 AC018695.5-201ENST00000605872 315 ntBASIC5.23□□□□□ -1.57
BRCC3P46736 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms