Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC1A1P43005 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC1A1P43005 HSPA8P18-201ENST00000439846 1928 ntBASIC5.08□□□□□ -1.6
SLC1A1P43005 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC1A1P43005 RNU1-83P-201ENST00000363426 164 ntBASIC5.08□□□□□ -1.6
SLC1A1P43005 RNA5SP435-201ENST00000364044 108 ntBASIC5.08□□□□□ -1.6
SLC1A1P43005 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC1A1P43005 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC1A1P43005 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SLC1A1P43005 BMS1P13-201ENST00000417301 885 ntBASIC5.08□□□□□ -1.6
SLC1A1P43005 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC1A1P43005 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC1A1P43005 AC012519.1-201ENST00000424588 610 ntBASIC5.08□□□□□ -1.6
SLC1A1P43005 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.08□□□□□ -1.6
SLC1A1P43005 RHOT1P3-201ENST00000436571 331 ntBASIC5.08□□□□□ -1.6
SLC1A1P43005 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC1A1P43005 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.08□□□□□ -1.6
SLC1A1P43005 AC108751.2-201ENST00000469993 231 ntBASIC5.08□□□□□ -1.6
SLC1A1P43005 RPS18P6-201ENST00000476880 458 ntBASIC5.08□□□□□ -1.6
SLC1A1P43005 HIGD1AP14-201ENST00000507617 282 ntBASIC5.08□□□□□ -1.6
SLC1A1P43005 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.08□□□□□ -1.6
SLC1A1P43005 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC1A1P43005 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC1A1P43005 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC1A1P43005 AL049839.1-201ENST00000556151 657 ntBASIC5.08□□□□□ -1.6
SLC1A1P43005 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC1A1P43005 MEMO1P5-201ENST00000604810 406 ntBASIC5.08□□□□□ -1.6
SLC1A1P43005 AL121932.1-201ENST00000605542 214 ntBASIC5.08□□□□□ -1.6
SLC1A1P43005 AP001521.2-201ENST00000608772 546 ntBASIC5.08□□□□□ -1.6
SLC1A1P43005 AC093799.2-201ENST00000610062 578 ntBASIC5.08□□□□□ -1.6
SLC1A1P43005 MIR6768-201ENST00000610734 72 ntBASIC5.08□□□□□ -1.6
SLC1A1P43005 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC1A1P43005 LINC01739-205ENST00000641890 573 ntBASIC5.08□□□□□ -1.6
SLC1A1P43005 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.08□□□□□ -1.6
SLC1A1P43005 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC1A1P43005 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SLC1A1P43005 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC1A1P43005 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC1A1P43005 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.08□□□□□ -1.6
SLC1A1P43005 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC1A1P43005 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC1A1P43005 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SLC1A1P43005 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC1A1P43005 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SLC1A1P43005 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SLC1A1P43005 AC126323.6-202ENST00000568092 3511 ntBASIC5.07□□□□□ -1.6
SLC1A1P43005 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.07□□□□□ -1.6
SLC1A1P43005 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SLC1A1P43005 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC1A1P43005 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.07□□□□□ -1.6
SLC1A1P43005 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SLC1A1P43005 AL929601.4-201ENST00000613011 1341 ntBASIC5.07□□□□□ -1.6
SLC1A1P43005 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SLC1A1P43005 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC1A1P43005 MTHFD2P5-201ENST00000320415 844 ntBASIC5.07□□□□□ -1.6
SLC1A1P43005 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SLC1A1P43005 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC1A1P43005 SNORA70-201ENST00000384436 135 ntBASIC5.07□□□□□ -1.6
SLC1A1P43005 AP002530.1-201ENST00000405705 684 ntBASIC5.07□□□□□ -1.6
SLC1A1P43005 AC010740.1-201ENST00000417035 684 ntBASIC5.07□□□□□ -1.6
SLC1A1P43005 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC1A1P43005 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC1A1P43005 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC1A1P43005 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.07□□□□□ -1.6
SLC1A1P43005 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC1A1P43005 AC104849.1-201ENST00000462623 405 ntBASIC5.07□□□□□ -1.6
SLC1A1P43005 RPL21P6-201ENST00000479171 504 ntBASIC5.07□□□□□ -1.6
SLC1A1P43005 AC004980.4-201ENST00000513375 203 ntBASIC5.07□□□□□ -1.6
SLC1A1P43005 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC1A1P43005 HMGB1P19-201ENST00000517578 577 ntBASIC5.07□□□□□ -1.6
SLC1A1P43005 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC1A1P43005 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.07□□□□□ -1.6
SLC1A1P43005 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC1A1P43005 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC1A1P43005 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC1A1P43005 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC1A1P43005 IMMP1LP1-201ENST00000605170 488 ntBASIC5.07□□□□□ -1.6
SLC1A1P43005 SNORD91B-202ENST00000608459 222 ntBASIC5.07□□□□□ -1.6
SLC1A1P43005 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SLC1A1P43005 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC1A1P43005 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.07□□□□□ -1.6
SLC1A1P43005 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC1A1P43005 DDX18P6-201ENST00000450119 1997 ntBASIC5.07□□□□□ -1.6
SLC1A1P43005 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.07□□□□□ -1.6
SLC1A1P43005 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
SLC1A1P43005 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.06□□□□□ -1.6
SLC1A1P43005 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC1A1P43005 AL121950.1-201ENST00000624993 2077 ntBASIC5.06□□□□□ -1.6
SLC1A1P43005 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC1A1P43005 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SLC1A1P43005 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC1A1P43005 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.06□□□□□ -1.6
SLC1A1P43005 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC1A1P43005 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC1A1P43005 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
SLC1A1P43005 BMS1P3-201ENST00000372011 932 ntBASIC5.06□□□□□ -1.6
SLC1A1P43005 GTF2IP5-201ENST00000414608 731 ntBASIC5.06□□□□□ -1.6
SLC1A1P43005 GJA6P-201ENST00000415117 1042 ntBASIC5.06□□□□□ -1.6
SLC1A1P43005 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.06□□□□□ -1.6
SLC1A1P43005 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms