Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC068533.2-201ENST00000411872 306 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXC12P31275 AL596448.1-201ENST00000415024 392 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.98□□□□□ -1.45
HOXC12P31275 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC5.98□□□□□ -1.45
HOXC12P31275 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXC12P31275 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXC12P31275 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXC12P31275 AL513175.1-201ENST00000431492 780 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 LARP1BP3-201ENST00000437229 869 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXC12P31275 AL512286.1-201ENST00000439244 400 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 IGKV1OR10-1-201ENST00000442306 329 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC12P31275 DNAJC19P1-201ENST00000455312 319 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 TPT1P7-201ENST00000458300 517 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXC12P31275 IGKV1OR22-5-201ENST00000458718 354 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 AC018638.3-201ENST00000461273 132 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.98□□□□□ -1.45
HOXC12P31275 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXC12P31275 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC12P31275 RPL7P38-201ENST00000488396 739 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC12P31275 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXC12P31275 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXC12P31275 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
HOXC12P31275 SNRPCP6-201ENST00000528310 210 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 AC016957.1-201ENST00000534895 309 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 OR6C7P-201ENST00000547875 934 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXC12P31275 GTF2IP22-201ENST00000554443 182 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXC12P31275 AL133241.1-201ENST00000556832 487 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 AC136619.2-201ENST00000563361 631 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 AC234778.2-201ENST00000566241 354 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.98□□□□□ -1.45
HOXC12P31275 AC012175.1-201ENST00000603755 531 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 NDUFA8P1-201ENST00000605525 367 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.98□□□□□ -1.45
HOXC12P31275 AC024560.3-201ENST00000608482 349 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC12P31275 uc_338.29-201ENST00000615099 168 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
HOXC12P31275 U1.31-201ENST00000620022 160 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 MIR7854-201ENST00000620068 65 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 AC015726.3-201ENST00000624501 418 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.98□□□□□ -1.45
HOXC12P31275 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.98□□□□□ -1.45
HOXC12P31275 ASNSP6-201ENST00000592770 1618 ntBASIC5.98□□□□□ -1.45
HOXC12P31275 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC12P31275 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXC12P31275 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXC12P31275 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC12P31275 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC12P31275 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC12P31275 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC12P31275 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC12P31275 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC12P31275 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.98□□□□□ -1.45
HOXC12P31275 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC5.98□□□□□ -1.45
HOXC12P31275 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC12P31275 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC5.97□□□□□ -1.45
HOXC12P31275 AC096921.2-201ENST00000561507 1916 ntBASIC5.97□□□□□ -1.45
HOXC12P31275 AP000866.6-201ENST00000638898 3579 ntBASIC5.97□□□□□ -1.45
HOXC12P31275 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC12P31275 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
HOXC12P31275 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
HOXC12P31275 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC12P31275 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC12P31275 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.97□□□□□ -1.45
HOXC12P31275 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.97□□□□□ -1.45
HOXC12P31275 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HOXC12P31275 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC12P31275 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC12P31275 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC12P31275 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HOXC12P31275 OR10J6P-201ENST00000289731 930 ntBASIC5.97□□□□□ -1.45
HOXC12P31275 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HOXC12P31275 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HOXC12P31275 RNU6-582P-201ENST00000362989 107 ntBASIC5.97□□□□□ -1.45
HOXC12P31275 RNU6-492P-201ENST00000363035 104 ntBASIC5.97□□□□□ -1.45
HOXC12P31275 RNA5SP232-201ENST00000364144 119 ntBASIC5.97□□□□□ -1.45
HOXC12P31275 RNU4-91P-201ENST00000364778 135 ntBASIC5.97□□□□□ -1.45
HOXC12P31275 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.97□□□□□ -1.45
HOXC12P31275 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
HOXC12P31275 RNU6-1042P-201ENST00000384204 107 ntBASIC5.97□□□□□ -1.45
HOXC12P31275 RNU6-729P-201ENST00000384399 107 ntBASIC5.97□□□□□ -1.45
HOXC12P31275 SNORA7A-201ENST00000384765 139 ntBASIC5.97□□□□□ -1.45
HOXC12P31275 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HOXC12P31275 RNA5SP474-201ENST00000391234 90 ntBASIC5.97□□□□□ -1.45
HOXC12P31275 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.97□□□□□ -1.45
HOXC12P31275 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.97□□□□□ -1.45
HOXC12P31275 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.97□□□□□ -1.45
HOXC12P31275 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.97□□□□□ -1.45
HOXC12P31275 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.97□□□□□ -1.45
HOXC12P31275 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.97□□□□□ -1.45
HOXC12P31275 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms