Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL158050.2-201ENST00000605336 568 ntBASIC5.18□□□□□ -1.58
ABCD3P28288 AP002802.2-201ENST00000605877 235 ntBASIC5.18□□□□□ -1.58
ABCD3P28288 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.18□□□□□ -1.58
ABCD3P28288 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.18□□□□□ -1.58
ABCD3P28288 AC006946.3-201ENST00000609791 756 ntBASIC5.18□□□□□ -1.58
ABCD3P28288 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.18□□□□□ -1.58
ABCD3P28288 AC004808.1-201ENST00000627671 721 ntBASIC5.18□□□□□ -1.58
ABCD3P28288 AC008691.1-209ENST00000642094 814 ntBASIC5.18□□□□□ -1.58
ABCD3P28288 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ABCD3P28288 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ABCD3P28288 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ABCD3P28288 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
ABCD3P28288 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
ABCD3P28288 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ABCD3P28288 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
ABCD3P28288 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
ABCD3P28288 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
ABCD3P28288 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ABCD3P28288 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
ABCD3P28288 SAMMSON-213ENST00000641336 1521 ntBASIC5.18□□□□□ -1.58
ABCD3P28288 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.17□□□□□ -1.58
ABCD3P28288 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ABCD3P28288 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
ABCD3P28288 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ABCD3P28288 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ABCD3P28288 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ABCD3P28288 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ABCD3P28288 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ABCD3P28288 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ABCD3P28288 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.17□□□□□ -1.58
ABCD3P28288 BCORP1-203ENST00000513194 5093 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ABCD3P28288 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
ABCD3P28288 AC009229.4-201ENST00000623854 1947 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 AC090017.1-201ENST00000548612 1779 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 PHKBP1-201ENST00000450951 1951 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 HSPD1P14-201ENST00000432666 1618 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ABCD3P28288 AL121886.1-201ENST00000358609 435 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 RNU6-543P-201ENST00000362576 108 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 RNA5SP326-201ENST00000363209 110 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 RNA5SP435-201ENST00000364044 108 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 U3.10-201ENST00000364459 214 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ABCD3P28288 SNORA5.1-201ENST00000384275 131 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 RNU6-932P-201ENST00000391108 106 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 AC087752.1-201ENST00000391360 558 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 NCSTNP1-201ENST00000406229 144 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
ABCD3P28288 AC092745.2-202ENST00000411880 369 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 OR6E1P-201ENST00000414424 923 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.17□□□□□ -1.58
ABCD3P28288 AL133173.1-201ENST00000423458 397 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 TNPO1P1-201ENST00000423641 1138 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 OR10T1P-201ENST00000424327 947 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.17□□□□□ -1.58
ABCD3P28288 NANOGP9-201ENST00000439890 892 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 AC068135.1-201ENST00000446164 246 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 TPMTP4-201ENST00000450749 678 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 AL450023.1-201ENST00000450868 751 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 AL161747.1-201ENST00000480068 358 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 ATP5LP5-201ENST00000483050 299 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 AC008427.1-201ENST00000503102 655 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 AC008565.1-201ENST00000509046 885 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 RNU6-347P-201ENST00000516658 105 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 SCARNA1-201ENST00000517138 166 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.17□□□□□ -1.58
ABCD3P28288 NRBF2P4-201ENST00000520874 850 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.17□□□□□ -1.58
ABCD3P28288 AC138701.1-201ENST00000524329 714 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.17□□□□□ -1.58
ABCD3P28288 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.17□□□□□ -1.58
ABCD3P28288 AC022404.1-201ENST00000555320 273 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 YWHAZP1-201ENST00000556286 722 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.17□□□□□ -1.58
ABCD3P28288 MRPS21P7-201ENST00000566937 238 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 AP000919.1-202ENST00000581139 1264 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 RN7SL622P-201ENST00000585292 275 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.17□□□□□ -1.58
ABCD3P28288 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.17□□□□□ -1.58
ABCD3P28288 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.17□□□□□ -1.58
ABCD3P28288 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.17□□□□□ -1.58
ABCD3P28288 AL137072.1-201ENST00000603444 466 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 FO393422.1-201ENST00000603908 708 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 AC011458.1-201ENST00000604034 617 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 OR7A19P-201ENST00000608051 733 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 AL356118.1-201ENST00000635272 1078 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 AL445984.1-201ENST00000637834 659 ntBASIC5.17□□□□□ -1.58
ABCD3P28288 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ABCD3P28288 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ABCD3P28288 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.17□□□□□ -1.58
ABCD3P28288 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
ABCD3P28288 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.17□□□□□ -1.58
ABCD3P28288 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
ABCD3P28288 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ABCD3P28288 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ABCD3P28288 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.17□□□□□ -1.58
ABCD3P28288 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
ABCD3P28288 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms