Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AP001324.1-201ENST00000428553 399 ntBASIC8.05□□□□□ -1.12
CFTRP13569 H3F3BP1-201ENST00000440551 403 ntBASIC8.05□□□□□ -1.12
CFTRP13569 AC104763.1-201ENST00000475274 360 ntBASIC8.05□□□□□ -1.12
CFTRP13569 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC8.05□□□□□ -1.12
CFTRP13569 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC8.05□□□□□ -1.12
CFTRP13569 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC8.05□□□□□ -1.12
CFTRP13569 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC8.05□□□□□ -1.12
CFTRP13569 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CFTRP13569 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CFTRP13569 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CFTRP13569 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC8.04□□□□□ -1.12
CFTRP13569 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
CFTRP13569 VN2R3P-201ENST00000422626 1412 ntBASIC8.04□□□□□ -1.12
CFTRP13569 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC8.04□□□□□ -1.12
CFTRP13569 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
CFTRP13569 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
CFTRP13569 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CFTRP13569 AL355834.1-201ENST00000556602 3965 ntBASIC8.04□□□□□ -1.12
CFTRP13569 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC8.04□□□□□ -1.12
CFTRP13569 SDHCP2-201ENST00000398565 501 ntBASIC8.04□□□□□ -1.12
CFTRP13569 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC8.04□□□□□ -1.12
CFTRP13569 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC8.04□□□□□ -1.12
CFTRP13569 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC8.04□□□□□ -1.12
CFTRP13569 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC8.04□□□□□ -1.12
CFTRP13569 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC8.04□□□□□ -1.12
CFTRP13569 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CFTRP13569 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CFTRP13569 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CFTRP13569 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CFTRP13569 AL021877.2-201ENST00000624442 10684 ntBASIC8.03□□□□□ -1.12
CFTRP13569 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC8.03□□□□□ -1.12
CFTRP13569 MR1-209ENST00000617803 7584 ntTSL 5 BASIC8.03□□□□□ -1.12
CFTRP13569 CEACAMP8-201ENST00000413902 580 ntBASIC8.03□□□□□ -1.12
CFTRP13569 TMBIM7P-201ENST00000418074 855 ntBASIC8.03□□□□□ -1.12
CFTRP13569 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CFTRP13569 AC006946.1-201ENST00000429106 328 ntBASIC8.03□□□□□ -1.12
CFTRP13569 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC8.03□□□□□ -1.12
CFTRP13569 PRPF38AP1-201ENST00000451976 933 ntBASIC8.03□□□□□ -1.12
CFTRP13569 RN7SL542P-201ENST00000467147 294 ntBASIC8.03□□□□□ -1.12
CFTRP13569 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC8.03□□□□□ -1.12
CFTRP13569 AC111000.6-201ENST00000514471 709 ntBASIC8.03□□□□□ -1.12
CFTRP13569 RNA5SP143-201ENST00000516936 115 ntBASIC8.03□□□□□ -1.12
CFTRP13569 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC8.03□□□□□ -1.12
CFTRP13569 MIR3158-1-201ENST00000583596 81 ntBASIC8.03□□□□□ -1.12
CFTRP13569 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC8.03□□□□□ -1.12
CFTRP13569 AC073137.1-201ENST00000605636 634 ntBASIC8.03□□□□□ -1.12
CFTRP13569 OR7A19P-201ENST00000608051 733 ntBASIC8.03□□□□□ -1.12
CFTRP13569 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CFTRP13569 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC8.03□□□□□ -1.12
CFTRP13569 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CFTRP13569 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CFTRP13569 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
CFTRP13569 AC090017.1-201ENST00000548612 1779 ntBASIC8.02□□□□□ -1.13
CFTRP13569 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CFTRP13569 AL451139.1-201ENST00000434718 346 ntBASIC8.02□□□□□ -1.13
CFTRP13569 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC8.02□□□□□ -1.13
CFTRP13569 RRM2P4-201ENST00000441721 562 ntBASIC8.02□□□□□ -1.13
CFTRP13569 TEK-204ENST00000519097 3836 ntTSL 2 BASIC8.02□□□□□ -1.13
CFTRP13569 OR8R1P-201ENST00000543943 764 ntBASIC8.02□□□□□ -1.13
CFTRP13569 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC8.02□□□□□ -1.13
CFTRP13569 RPL7P50-201ENST00000600588 727 ntBASIC8.02□□□□□ -1.13
CFTRP13569 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CFTRP13569 AC099676.1-201ENST00000608886 657 ntBASIC8.02□□□□□ -1.13
CFTRP13569 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CFTRP13569 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
CFTRP13569 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC8.02□□□□□ -1.13
CFTRP13569 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC8.02□□□□□ -1.13
CFTRP13569 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CFTRP13569 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
CFTRP13569 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
CFTRP13569 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
CFTRP13569 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CFTRP13569 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CFTRP13569 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CFTRP13569 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
CFTRP13569 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC8.02□□□□□ -1.13
CFTRP13569 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
CFTRP13569 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC8.02□□□□□ -1.13
CFTRP13569 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CFTRP13569 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CFTRP13569 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
CFTRP13569 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.13
CFTRP13569 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CFTRP13569 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CFTRP13569 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CFTRP13569 AC105137.1-201ENST00000484355 562 ntBASIC8.01□□□□□ -1.13
CFTRP13569 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC8.01□□□□□ -1.13
CFTRP13569 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC8.01□□□□□ -1.13
CFTRP13569 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC8.01□□□□□ -1.13
CFTRP13569 RN7SL176P-201ENST00000580352 264 ntBASIC8.01□□□□□ -1.13
CFTRP13569 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC8.01□□□□□ -1.13
CFTRP13569 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CFTRP13569 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
CFTRP13569 EIF2AP4-201ENST00000424793 1781 ntBASIC8.01□□□□□ -1.13
CFTRP13569 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC8.01□□□□□ -1.13
CFTRP13569 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CFTRP13569 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CFTRP13569 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CFTRP13569 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CFTRP13569 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms