Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 SYT14P1-201ENST00000481459 721 ntBASIC5.27□□□□□ -1.57
PCNAP12004 OR5H3P-201ENST00000502817 919 ntBASIC5.27□□□□□ -1.57
PCNAP12004 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.27□□□□□ -1.57
PCNAP12004 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCNAP12004 AC138866.2-201ENST00000508650 584 ntBASIC5.27□□□□□ -1.57
PCNAP12004 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.27□□□□□ -1.57
PCNAP12004 TPT1P8-201ENST00000510120 555 ntBASIC5.27□□□□□ -1.57
PCNAP12004 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.27□□□□□ -1.57
PCNAP12004 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCNAP12004 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCNAP12004 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.27□□□□□ -1.57
PCNAP12004 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.27□□□□□ -1.57
PCNAP12004 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.27□□□□□ -1.57
PCNAP12004 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.27□□□□□ -1.57
PCNAP12004 AC010547.6-201ENST00000571789 193 ntBASIC5.27□□□□□ -1.57
PCNAP12004 MIR4505-201ENST00000582238 73 ntBASIC5.27□□□□□ -1.57
PCNAP12004 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.27□□□□□ -1.57
PCNAP12004 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.27□□□□□ -1.57
PCNAP12004 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.27□□□□□ -1.57
PCNAP12004 AP000769.2-201ENST00000602344 396 ntBASIC5.27□□□□□ -1.57
PCNAP12004 AC112503.2-201ENST00000609005 552 ntBASIC5.27□□□□□ -1.57
PCNAP12004 AC019131.2-201ENST00000609071 870 ntBASIC5.27□□□□□ -1.57
PCNAP12004 AP005229.2-201ENST00000609980 697 ntBASIC5.27□□□□□ -1.57
PCNAP12004 AL118522.2-201ENST00000616045 615 ntBASIC5.27□□□□□ -1.57
PCNAP12004 MIR6861-201ENST00000618657 64 ntBASIC5.27□□□□□ -1.57
PCNAP12004 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
PCNAP12004 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.27□□□□□ -1.57
PCNAP12004 AP001962.1-201ENST00000624114 559 ntBASIC5.27□□□□□ -1.57
PCNAP12004 AC004808.1-201ENST00000627671 721 ntBASIC5.27□□□□□ -1.57
PCNAP12004 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.27□□□□□ -1.57
PCNAP12004 AC073869.8-201ENST00000641806 335 ntBASIC5.27□□□□□ -1.57
PCNAP12004 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCNAP12004 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCNAP12004 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCNAP12004 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCNAP12004 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.27□□□□□ -1.57
PCNAP12004 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCNAP12004 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCNAP12004 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCNAP12004 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCNAP12004 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCNAP12004 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
PCNAP12004 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCNAP12004 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
PCNAP12004 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.26□□□□□ -1.57
PCNAP12004 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.26□□□□□ -1.57
PCNAP12004 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCNAP12004 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCNAP12004 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCNAP12004 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
PCNAP12004 TMSB4XP4-201ENST00000323496 618 ntBASIC5.26□□□□□ -1.57
PCNAP12004 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCNAP12004 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCNAP12004 RNU6-481P-201ENST00000384194 107 ntBASIC5.26□□□□□ -1.57
PCNAP12004 RNU6-1000P-201ENST00000391066 106 ntBASIC5.26□□□□□ -1.57
PCNAP12004 PPIAP9-201ENST00000403866 498 ntBASIC5.26□□□□□ -1.57
PCNAP12004 AL158825.1-201ENST00000414735 521 ntBASIC5.26□□□□□ -1.57
PCNAP12004 RPS26P13-201ENST00000419030 330 ntBASIC5.26□□□□□ -1.57
PCNAP12004 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.26□□□□□ -1.57
PCNAP12004 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.26□□□□□ -1.57
PCNAP12004 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.26□□□□□ -1.57
PCNAP12004 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.26□□□□□ -1.57
PCNAP12004 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.26□□□□□ -1.57
PCNAP12004 AC011242.1-201ENST00000433596 1158 ntBASIC5.26□□□□□ -1.57
PCNAP12004 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.26□□□□□ -1.57
PCNAP12004 RPL23AP19-201ENST00000436229 369 ntBASIC5.26□□□□□ -1.57
PCNAP12004 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.26□□□□□ -1.57
PCNAP12004 RPL31P15-201ENST00000449770 338 ntBASIC5.26□□□□□ -1.57
PCNAP12004 RBMY2TP-201ENST00000451162 947 ntBASIC5.26□□□□□ -1.57
PCNAP12004 YWHAEP1-201ENST00000453697 763 ntBASIC5.26□□□□□ -1.57
PCNAP12004 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.26□□□□□ -1.57
PCNAP12004 CYCSP20-201ENST00000473154 315 ntBASIC5.26□□□□□ -1.57
PCNAP12004 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.26□□□□□ -1.57
PCNAP12004 AC021106.1-201ENST00000509020 1058 ntBASIC5.26□□□□□ -1.57
PCNAP12004 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.26□□□□□ -1.57
PCNAP12004 AC109464.1-201ENST00000511091 819 ntBASIC5.26□□□□□ -1.57
PCNAP12004 AC091912.1-201ENST00000511351 248 ntBASIC5.26□□□□□ -1.57
PCNAP12004 AC021193.1-201ENST00000511607 420 ntBASIC5.26□□□□□ -1.57
PCNAP12004 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.26□□□□□ -1.57
PCNAP12004 RNU5A-7P-201ENST00000515979 116 ntBASIC5.26□□□□□ -1.57
PCNAP12004 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.26□□□□□ -1.57
PCNAP12004 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.26□□□□□ -1.57
PCNAP12004 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.26□□□□□ -1.57
PCNAP12004 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.26□□□□□ -1.57
PCNAP12004 AC015982.1-201ENST00000608113 465 ntBASIC5.26□□□□□ -1.57
PCNAP12004 uc_338.7-201ENST00000621834 124 ntBASIC5.26□□□□□ -1.57
PCNAP12004 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.26□□□□□ -1.57
PCNAP12004 CASC19-221ENST00000641309 1382 ntBASIC5.26□□□□□ -1.57
PCNAP12004 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.26□□□□□ -1.57
PCNAP12004 CASC19-261ENST00000641853 1638 ntBASIC5.26□□□□□ -1.57
PCNAP12004 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PCNAP12004 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.26□□□□□ -1.57
PCNAP12004 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCNAP12004 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PCNAP12004 AC104118.1-201ENST00000607625 1589 ntBASIC5.25□□□□□ -1.57
PCNAP12004 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCNAP12004 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.25□□□□□ -1.57
PCNAP12004 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.25□□□□□ -1.57
PCNAP12004 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCNAP12004 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms