Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TOP1P11387 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TOP1P11387 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.79□□□□□ -1.48
TOP1P11387 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TOP1P11387 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.79□□□□□ -1.48
TOP1P11387 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TOP1P11387 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TOP1P11387 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TOP1P11387 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.79□□□□□ -1.48
TOP1P11387 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TOP1P11387 RN7SKP103-201ENST00000363848 320 ntBASIC5.79□□□□□ -1.48
TOP1P11387 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.79□□□□□ -1.48
TOP1P11387 AL139128.1-201ENST00000413921 941 ntBASIC5.79□□□□□ -1.48
TOP1P11387 GTF2IP5-201ENST00000414608 731 ntBASIC5.79□□□□□ -1.48
TOP1P11387 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.79□□□□□ -1.48
TOP1P11387 OR52J1P-201ENST00000450596 932 ntBASIC5.79□□□□□ -1.48
TOP1P11387 AC098583.1-201ENST00000480875 255 ntBASIC5.79□□□□□ -1.48
TOP1P11387 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.79□□□□□ -1.48
TOP1P11387 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.79□□□□□ -1.48
TOP1P11387 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.79□□□□□ -1.48
TOP1P11387 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.79□□□□□ -1.48
TOP1P11387 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.79□□□□□ -1.48
TOP1P11387 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
TOP1P11387 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.79□□□□□ -1.48
TOP1P11387 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.79□□□□□ -1.48
TOP1P11387 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.79□□□□□ -1.48
TOP1P11387 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TOP1P11387 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.79□□□□□ -1.48
TOP1P11387 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TOP1P11387 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.79□□□□□ -1.48
TOP1P11387 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TOP1P11387 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.79□□□□□ -1.48
TOP1P11387 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.79□□□□□ -1.48
TOP1P11387 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.79□□□□□ -1.48
TOP1P11387 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TOP1P11387 TTC39DP-201ENST00000416781 1688 ntBASIC5.79□□□□□ -1.48
TOP1P11387 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
TOP1P11387 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
TOP1P11387 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.78□□□□□ -1.48
TOP1P11387 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.78□□□□□ -1.48
TOP1P11387 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TOP1P11387 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.78□□□□□ -1.48
TOP1P11387 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.78□□□□□ -1.48
TOP1P11387 AC006466.1-201ENST00000438721 289 ntBASIC5.78□□□□□ -1.48
TOP1P11387 SCAND3P1-201ENST00000439854 1060 ntBASIC5.78□□□□□ -1.48
TOP1P11387 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.78□□□□□ -1.48
TOP1P11387 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.78□□□□□ -1.48
TOP1P11387 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.78□□□□□ -1.48
TOP1P11387 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.78□□□□□ -1.48
TOP1P11387 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TOP1P11387 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.78□□□□□ -1.48
TOP1P11387 RPS4XP12-201ENST00000461747 709 ntBASIC5.78□□□□□ -1.48
TOP1P11387 AC090142.2-201ENST00000483263 416 ntBASIC5.78□□□□□ -1.48
TOP1P11387 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.78□□□□□ -1.48
TOP1P11387 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.78□□□□□ -1.48
TOP1P11387 RNU6-513P-201ENST00000516104 104 ntBASIC5.78□□□□□ -1.48
TOP1P11387 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.78□□□□□ -1.48
TOP1P11387 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.78□□□□□ -1.48
TOP1P11387 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
TOP1P11387 AC020910.3-201ENST00000603701 874 ntBASIC5.78□□□□□ -1.48
TOP1P11387 AL031320.1-201ENST00000604177 357 ntBASIC5.78□□□□□ -1.48
TOP1P11387 AC016252.1-201ENST00000609721 474 ntBASIC5.78□□□□□ -1.48
TOP1P11387 AL049794.2-201ENST00000616301 365 ntBASIC5.78□□□□□ -1.48
TOP1P11387 BX005214.3-202ENST00000619809 325 ntBASIC5.78□□□□□ -1.48
TOP1P11387 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.78□□□□□ -1.48
TOP1P11387 AL672167.1-204ENST00000641875 3017 ntBASIC5.78□□□□□ -1.48
TOP1P11387 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TOP1P11387 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
TOP1P11387 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TOP1P11387 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.78□□□□□ -1.48
TOP1P11387 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.78□□□□□ -1.48
TOP1P11387 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TOP1P11387 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
TOP1P11387 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.48
TOP1P11387 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.48
TOP1P11387 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.77□□□□□ -1.48
TOP1P11387 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.77□□□□□ -1.49
TOP1P11387 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
TOP1P11387 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.77□□□□□ -1.49
TOP1P11387 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TOP1P11387 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
TOP1P11387 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TOP1P11387 SNORA73.1-201ENST00000363107 205 ntBASIC5.77□□□□□ -1.49
TOP1P11387 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.77□□□□□ -1.49
TOP1P11387 RNA5SP87-201ENST00000384155 118 ntBASIC5.77□□□□□ -1.49
TOP1P11387 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TOP1P11387 AL360081.1-201ENST00000428299 555 ntBASIC5.77□□□□□ -1.49
TOP1P11387 AC007559.1-201ENST00000428736 355 ntBASIC5.77□□□□□ -1.49
TOP1P11387 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.77□□□□□ -1.49
TOP1P11387 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.77□□□□□ -1.49
TOP1P11387 RPL23AP56-201ENST00000460778 453 ntBASIC5.77□□□□□ -1.49
TOP1P11387 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.77□□□□□ -1.49
TOP1P11387 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.77□□□□□ -1.49
TOP1P11387 RNA5SP392-201ENST00000516905 112 ntBASIC5.77□□□□□ -1.49
TOP1P11387 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.77□□□□□ -1.49
TOP1P11387 MORF4L1P3-201ENST00000525966 950 ntBASIC5.77□□□□□ -1.49
TOP1P11387 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.77□□□□□ -1.49
TOP1P11387 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.77□□□□□ -1.49
TOP1P11387 AC116553.2-201ENST00000564203 463 ntBASIC5.77□□□□□ -1.49
TOP1P11387 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms