Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.44□□□□□ -1.54
CHRNA1P02708 RNA5SP296-201ENST00000410523 111 ntBASIC5.44□□□□□ -1.54
CHRNA1P02708 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.44□□□□□ -1.54
CHRNA1P02708 TRGV7-201ENST00000427089 353 ntBASIC5.44□□□□□ -1.54
CHRNA1P02708 AL136231.1-201ENST00000429407 730 ntBASIC5.44□□□□□ -1.54
CHRNA1P02708 AC016712.1-201ENST00000431088 378 ntBASIC5.44□□□□□ -1.54
CHRNA1P02708 AL359265.2-201ENST00000434367 631 ntBASIC5.44□□□□□ -1.54
CHRNA1P02708 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.44□□□□□ -1.54
CHRNA1P02708 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.44□□□□□ -1.54
CHRNA1P02708 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.44□□□□□ -1.54
CHRNA1P02708 AC010733.1-201ENST00000451515 401 ntBASIC5.44□□□□□ -1.54
CHRNA1P02708 AC005412.2-201ENST00000492004 341 ntBASIC5.44□□□□□ -1.54
CHRNA1P02708 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.44□□□□□ -1.54
CHRNA1P02708 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.44□□□□□ -1.54
CHRNA1P02708 RN7SKP276-201ENST00000516242 268 ntBASIC5.44□□□□□ -1.54
CHRNA1P02708 RNU4-18P-201ENST00000516751 149 ntBASIC5.44□□□□□ -1.54
CHRNA1P02708 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.44□□□□□ -1.54
CHRNA1P02708 C1GALT1P3-201ENST00000522049 819 ntBASIC5.44□□□□□ -1.54
CHRNA1P02708 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.44□□□□□ -1.54
CHRNA1P02708 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.44□□□□□ -1.54
CHRNA1P02708 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.44□□□□□ -1.54
CHRNA1P02708 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.44□□□□□ -1.54
CHRNA1P02708 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.44□□□□□ -1.54
CHRNA1P02708 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.44□□□□□ -1.54
CHRNA1P02708 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.44□□□□□ -1.54
CHRNA1P02708 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.44□□□□□ -1.54
CHRNA1P02708 AC087821.1-201ENST00000623639 567 ntBASIC5.44□□□□□ -1.54
CHRNA1P02708 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.44□□□□□ -1.54
CHRNA1P02708 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CHRNA1P02708 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CHRNA1P02708 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CHRNA1P02708 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CHRNA1P02708 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CHRNA1P02708 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CHRNA1P02708 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CHRNA1P02708 ZNF652P1-201ENST00000442420 1309 ntBASIC5.44□□□□□ -1.54
CHRNA1P02708 AC233968.1-201ENST00000611212 1300 ntBASIC5.44□□□□□ -1.54
CHRNA1P02708 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CHRNA1P02708 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
CHRNA1P02708 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA1P02708 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.43□□□□□ -1.54
CHRNA1P02708 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CHRNA1P02708 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA1P02708 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA1P02708 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA1P02708 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA1P02708 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA1P02708 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA1P02708 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA1P02708 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.43□□□□□ -1.54
CHRNA1P02708 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA1P02708 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA1P02708 RNA5SP241-201ENST00000391326 114 ntBASIC5.43□□□□□ -1.54
CHRNA1P02708 AC069213.2-201ENST00000420238 366 ntBASIC5.43□□□□□ -1.54
CHRNA1P02708 AL034379.1-201ENST00000423216 253 ntBASIC5.43□□□□□ -1.54
CHRNA1P02708 HMGN2P27-201ENST00000427352 270 ntBASIC5.43□□□□□ -1.54
CHRNA1P02708 COX6CP13-201ENST00000428703 226 ntBASIC5.43□□□□□ -1.54
CHRNA1P02708 OR2B7P-201ENST00000429302 934 ntBASIC5.43□□□□□ -1.54
CHRNA1P02708 NRBF2P3-201ENST00000432731 865 ntBASIC5.43□□□□□ -1.54
CHRNA1P02708 AC091390.1-201ENST00000433904 331 ntBASIC5.43□□□□□ -1.54
CHRNA1P02708 AL450023.3-201ENST00000440592 271 ntBASIC5.43□□□□□ -1.54
CHRNA1P02708 SLC25A18P1-201ENST00000449385 454 ntBASIC5.43□□□□□ -1.54
CHRNA1P02708 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CHRNA1P02708 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.43□□□□□ -1.54
CHRNA1P02708 TRBV8-1-201ENST00000481590 279 ntBASIC5.43□□□□□ -1.54
CHRNA1P02708 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.43□□□□□ -1.54
CHRNA1P02708 RN7SL441P-201ENST00000492388 296 ntBASIC5.43□□□□□ -1.54
CHRNA1P02708 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.43□□□□□ -1.54
CHRNA1P02708 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.43□□□□□ -1.54
CHRNA1P02708 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.43□□□□□ -1.54
CHRNA1P02708 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
CHRNA1P02708 TVP23CP2-201ENST00000571473 623 ntBASIC5.43□□□□□ -1.54
CHRNA1P02708 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.43□□□□□ -1.54
CHRNA1P02708 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.43□□□□□ -1.54
CHRNA1P02708 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.43□□□□□ -1.54
CHRNA1P02708 AL731566.2-201ENST00000618971 317 ntBASIC5.43□□□□□ -1.54
CHRNA1P02708 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.43□□□□□ -1.54
CHRNA1P02708 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA1P02708 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CHRNA1P02708 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CHRNA1P02708 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA1P02708 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA1P02708 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA1P02708 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CHRNA1P02708 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CHRNA1P02708 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA1P02708 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CHRNA1P02708 ECM1P2-201ENST00000503354 1577 ntBASIC5.42□□□□□ -1.54
CHRNA1P02708 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA1P02708 AC010928.1-201ENST00000592477 1447 ntBASIC5.42□□□□□ -1.54
CHRNA1P02708 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA1P02708 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
CHRNA1P02708 AL035079.1-201ENST00000405210 287 ntBASIC5.42□□□□□ -1.54
CHRNA1P02708 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA1P02708 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.42□□□□□ -1.54
CHRNA1P02708 DNAJC19P7-201ENST00000428811 344 ntBASIC5.42□□□□□ -1.54
CHRNA1P02708 AC068287.1-201ENST00000430283 295 ntBASIC5.42□□□□□ -1.54
CHRNA1P02708 OR6C71P-201ENST00000432580 913 ntBASIC5.42□□□□□ -1.54
CHRNA1P02708 AC005154.2-201ENST00000438110 379 ntBASIC5.42□□□□□ -1.54
CHRNA1P02708 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms