Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.16□□□□□ -1.58
LDLRP01130 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.16□□□□□ -1.58
LDLRP01130 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LDLRP01130 AC016542.1-201ENST00000608259 493 ntBASIC5.16□□□□□ -1.58
LDLRP01130 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.16□□□□□ -1.58
LDLRP01130 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LDLRP01130 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.16□□□□□ -1.58
LDLRP01130 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
LDLRP01130 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.16□□□□□ -1.58
LDLRP01130 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LDLRP01130 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
LDLRP01130 MT-RNR2-201ENST00000387347 1559 ntBASIC5.16□□□□□ -1.58
LDLRP01130 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LDLRP01130 AL606537.1-201ENST00000607258 2011 ntBASIC5.16□□□□□ -1.58
LDLRP01130 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LDLRP01130 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.16□□□□□ -1.58
LDLRP01130 AC110792.3-201ENST00000595906 1614 ntBASIC5.15□□□□□ -1.58
LDLRP01130 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.15□□□□□ -1.58
LDLRP01130 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LDLRP01130 MRE11P1-201ENST00000464884 2127 ntBASIC5.15□□□□□ -1.58
LDLRP01130 AL138820.1-201ENST00000617901 5305 ntBASIC5.15□□□□□ -1.58
LDLRP01130 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
LDLRP01130 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
LDLRP01130 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
LDLRP01130 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LDLRP01130 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LDLRP01130 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LDLRP01130 AL603750.1-201ENST00000624216 1717 ntBASIC5.15□□□□□ -1.58
LDLRP01130 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
LDLRP01130 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LDLRP01130 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.15□□□□□ -1.58
LDLRP01130 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LDLRP01130 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
LDLRP01130 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
LDLRP01130 AC010132.2-201ENST00000295493 1043 ntBASIC5.15□□□□□ -1.59
LDLRP01130 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.15□□□□□ -1.59
LDLRP01130 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
LDLRP01130 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LDLRP01130 RNU6-1251P-201ENST00000364502 107 ntBASIC5.15□□□□□ -1.59
LDLRP01130 RMRPP5-201ENST00000411156 267 ntBASIC5.15□□□□□ -1.59
LDLRP01130 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.15□□□□□ -1.59
LDLRP01130 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.15□□□□□ -1.59
LDLRP01130 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.15□□□□□ -1.59
LDLRP01130 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LDLRP01130 AC073310.1-201ENST00000423226 1033 ntBASIC5.15□□□□□ -1.59
LDLRP01130 MTND4P24-201ENST00000424002 397 ntBASIC5.15□□□□□ -1.59
LDLRP01130 AC073508.1-201ENST00000428866 656 ntBASIC5.15□□□□□ -1.59
LDLRP01130 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.15□□□□□ -1.59
LDLRP01130 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.15□□□□□ -1.59
LDLRP01130 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.15□□□□□ -1.59
LDLRP01130 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.15□□□□□ -1.59
LDLRP01130 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.15□□□□□ -1.59
LDLRP01130 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.15□□□□□ -1.59
LDLRP01130 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.15□□□□□ -1.59
LDLRP01130 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LDLRP01130 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.15□□□□□ -1.59
LDLRP01130 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.15□□□□□ -1.59
LDLRP01130 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.15□□□□□ -1.59
LDLRP01130 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.15□□□□□ -1.59
LDLRP01130 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.15□□□□□ -1.59
LDLRP01130 AC006349.1-201ENST00000555526 235 ntBASIC5.15□□□□□ -1.59
LDLRP01130 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.15□□□□□ -1.59
LDLRP01130 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.15□□□□□ -1.59
LDLRP01130 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.15□□□□□ -1.59
LDLRP01130 MIR4646-201ENST00000580775 63 ntBASIC5.15□□□□□ -1.59
LDLRP01130 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.15□□□□□ -1.59
LDLRP01130 AC087763.1-201ENST00000603391 286 ntBASIC5.15□□□□□ -1.59
LDLRP01130 AC006363.1-201ENST00000603806 463 ntBASIC5.15□□□□□ -1.59
LDLRP01130 CR589904.2-201ENST00000612533 440 ntBASIC5.15□□□□□ -1.59
LDLRP01130 AC048344.4-201ENST00000619744 527 ntBASIC5.15□□□□□ -1.59
LDLRP01130 AC105105.5-201ENST00000622635 1294 ntBASIC5.15□□□□□ -1.59
LDLRP01130 AC090506.2-201ENST00000624521 419 ntBASIC5.15□□□□□ -1.59
LDLRP01130 AL390318.1-201ENST00000624564 687 ntBASIC5.15□□□□□ -1.59
LDLRP01130 OR5AC4P-202ENST00000642086 985 ntBASIC5.15□□□□□ -1.59
LDLRP01130 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
LDLRP01130 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LDLRP01130 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
LDLRP01130 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
LDLRP01130 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.15□□□□□ -1.59
LDLRP01130 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.15□□□□□ -1.59
LDLRP01130 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
LDLRP01130 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.14□□□□□ -1.59
LDLRP01130 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LDLRP01130 HSPA8P14-201ENST00000552265 1805 ntBASIC5.14□□□□□ -1.59
LDLRP01130 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LDLRP01130 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
LDLRP01130 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
LDLRP01130 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.14□□□□□ -1.59
LDLRP01130 SNORD51.1-201ENST00000365405 77 ntBASIC5.14□□□□□ -1.59
LDLRP01130 OR13C3-201ENST00000374781 1108 ntBASIC5.14□□□□□ -1.59
LDLRP01130 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.14□□□□□ -1.59
LDLRP01130 AL589647.1-201ENST00000402485 466 ntBASIC5.14□□□□□ -1.59
LDLRP01130 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.14□□□□□ -1.59
LDLRP01130 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.14□□□□□ -1.59
LDLRP01130 AC005033.1-201ENST00000428904 813 ntBASIC5.14□□□□□ -1.59
LDLRP01130 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LDLRP01130 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.14□□□□□ -1.59
LDLRP01130 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.14□□□□□ -1.59
LDLRP01130 XKRY2-201ENST00000442362 1093 ntBASIC5.14□□□□□ -1.59
LDLRP01130 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms