Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PDGFBP01127 AC022784.5-201ENST00000522241 437 ntBASIC5.22□□□□□ -1.57
PDGFBP01127 AC018442.3-201ENST00000523025 183 ntBASIC5.22□□□□□ -1.57
PDGFBP01127 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.22□□□□□ -1.57
PDGFBP01127 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.22□□□□□ -1.57
PDGFBP01127 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.22□□□□□ -1.57
PDGFBP01127 KPNA2P3-201ENST00000584190 848 ntBASIC5.22□□□□□ -1.57
PDGFBP01127 CCDC58P3-201ENST00000590792 430 ntBASIC5.22□□□□□ -1.57
PDGFBP01127 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PDGFBP01127 AC093765.1-201ENST00000603758 881 ntBASIC5.22□□□□□ -1.57
PDGFBP01127 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.22□□□□□ -1.57
PDGFBP01127 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.22□□□□□ -1.57
PDGFBP01127 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.22□□□□□ -1.57
PDGFBP01127 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PDGFBP01127 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDGFBP01127 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDGFBP01127 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDGFBP01127 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDGFBP01127 OR4F13P-202ENST00000560066 2054 ntBASIC5.22□□□□□ -1.57
PDGFBP01127 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.22□□□□□ -1.57
PDGFBP01127 AL355834.1-201ENST00000556602 3965 ntBASIC5.22□□□□□ -1.57
PDGFBP01127 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.22□□□□□ -1.57
PDGFBP01127 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
PDGFBP01127 AL360270.2-201ENST00000562952 5985 ntBASIC5.21□□□□□ -1.57
PDGFBP01127 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.21□□□□□ -1.57
PDGFBP01127 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFBP01127 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
PDGFBP01127 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PDGFBP01127 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFBP01127 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PDGFBP01127 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
PDGFBP01127 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFBP01127 MIR298-201ENST00000401212 88 ntBASIC5.21□□□□□ -1.58
PDGFBP01127 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFBP01127 GLUD1P9-201ENST00000420997 1173 ntBASIC5.21□□□□□ -1.58
PDGFBP01127 AL592293.2-201ENST00000422292 996 ntBASIC5.21□□□□□ -1.58
PDGFBP01127 AJ239321.1-201ENST00000424255 564 ntBASIC5.21□□□□□ -1.58
PDGFBP01127 AL732292.1-201ENST00000426692 226 ntBASIC5.21□□□□□ -1.58
PDGFBP01127 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.21□□□□□ -1.58
PDGFBP01127 KRT8P51-201ENST00000438938 274 ntBASIC5.21□□□□□ -1.58
PDGFBP01127 IGBP1P3-201ENST00000447449 1000 ntBASIC5.21□□□□□ -1.58
PDGFBP01127 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.21□□□□□ -1.58
PDGFBP01127 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.21□□□□□ -1.58
PDGFBP01127 AC006427.1-201ENST00000514359 712 ntBASIC5.21□□□□□ -1.58
PDGFBP01127 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.21□□□□□ -1.58
PDGFBP01127 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.21□□□□□ -1.58
PDGFBP01127 AC009303.3-201ENST00000591103 736 ntBASIC5.21□□□□□ -1.58
PDGFBP01127 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.21□□□□□ -1.58
PDGFBP01127 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.21□□□□□ -1.58
PDGFBP01127 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PDGFBP01127 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.21□□□□□ -1.58
PDGFBP01127 ASNSP1-204ENST00000641977 1664 ntBASIC5.21□□□□□ -1.58
PDGFBP01127 AL122126.1-201ENST00000546905 1318 ntBASIC5.21□□□□□ -1.58
PDGFBP01127 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFBP01127 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFBP01127 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.2□□□□□ -1.58
PDGFBP01127 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
PDGFBP01127 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFBP01127 Z95114.1-201ENST00000624264 14574 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PDGFBP01127 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
PDGFBP01127 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFBP01127 AC110792.3-201ENST00000595906 1614 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 AL034549.2-201ENST00000618285 3373 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFBP01127 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.2□□□□□ -1.58
PDGFBP01127 SAMMSON-213ENST00000641336 1521 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 MIR134-201ENST00000385258 73 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 SNORA57.1-201ENST00000391227 145 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 RNU4-25P-201ENST00000410569 230 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 RN7SKP106-201ENST00000410832 272 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.2□□□□□ -1.58
PDGFBP01127 RIMKLBP2-201ENST00000424737 654 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.2□□□□□ -1.58
PDGFBP01127 BMS1P19-201ENST00000433925 393 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.2□□□□□ -1.58
PDGFBP01127 AL157385.1-201ENST00000446973 268 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 OR1H1P-201ENST00000448731 937 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 CCRL1P1-201ENST00000449542 1053 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 CEACAMP6-201ENST00000452007 574 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 AL133244.1-201ENST00000456007 258 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 OR52A4P-201ENST00000472867 958 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 RPL21P129-201ENST00000491732 478 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFBP01127 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.2□□□□□ -1.58
PDGFBP01127 RN7SKP276-201ENST00000516242 268 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 RNU6-751P-201ENST00000516382 101 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.2□□□□□ -1.58
PDGFBP01127 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.2□□□□□ -1.58
PDGFBP01127 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFBP01127 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.2□□□□□ -1.58
PDGFBP01127 AC009027.1-201ENST00000604510 479 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 RMST_5.1-201ENST00000618704 126 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.2□□□□□ -1.58
PDGFBP01127 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.2□□□□□ -1.58
PDGFBP01127 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PDGFBP01127 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.2□□□□□ -1.58
PDGFBP01127 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFBP01127 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFBP01127 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms