Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.92□□□□□ -1.62
CLPTM1O96005 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.92□□□□□ -1.62
CLPTM1O96005 AC008691.1-209ENST00000642094 814 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLPTM1O96005 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.92□□□□□ -1.62
CLPTM1O96005 Z95327.2-201ENST00000414579 1873 ntBASIC4.92□□□□□ -1.62
CLPTM1O96005 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLPTM1O96005 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
CLPTM1O96005 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.91□□□□□ -1.62
CLPTM1O96005 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CLPTM1O96005 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CLPTM1O96005 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLPTM1O96005 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLPTM1O96005 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLPTM1O96005 AL512430.2-201ENST00000406786 339 ntBASIC4.91□□□□□ -1.62
CLPTM1O96005 RMRPP5-201ENST00000411156 267 ntBASIC4.91□□□□□ -1.62
CLPTM1O96005 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.91□□□□□ -1.62
CLPTM1O96005 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.91□□□□□ -1.62
CLPTM1O96005 MTND2P15-201ENST00000418575 892 ntBASIC4.91□□□□□ -1.62
CLPTM1O96005 AC013429.2-201ENST00000418798 781 ntBASIC4.91□□□□□ -1.62
CLPTM1O96005 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.91□□□□□ -1.62
CLPTM1O96005 AC093155.2-201ENST00000420734 937 ntBASIC4.91□□□□□ -1.62
CLPTM1O96005 AL662874.1-201ENST00000426065 230 ntBASIC4.91□□□□□ -1.62
CLPTM1O96005 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.91□□□□□ -1.62
CLPTM1O96005 AC073508.1-201ENST00000428866 656 ntBASIC4.91□□□□□ -1.62
CLPTM1O96005 AL022331.1-201ENST00000429025 477 ntBASIC4.91□□□□□ -1.62
CLPTM1O96005 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.91□□□□□ -1.62
CLPTM1O96005 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.91□□□□□ -1.62
CLPTM1O96005 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.91□□□□□ -1.62
CLPTM1O96005 YWHAEP1-201ENST00000453697 763 ntBASIC4.91□□□□□ -1.62
CLPTM1O96005 RN7SL583P-201ENST00000475692 287 ntBASIC4.91□□□□□ -1.62
CLPTM1O96005 RN7SL814P-201ENST00000487715 300 ntBASIC4.91□□□□□ -1.62
CLPTM1O96005 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.91□□□□□ -1.62
CLPTM1O96005 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.91□□□□□ -1.62
CLPTM1O96005 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.91□□□□□ -1.62
CLPTM1O96005 RNA5SP249-201ENST00000516127 99 ntBASIC4.91□□□□□ -1.62
CLPTM1O96005 AC027308.1-201ENST00000517993 110 ntBASIC4.91□□□□□ -1.62
CLPTM1O96005 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CLPTM1O96005 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
CLPTM1O96005 IGKV3D-34-201ENST00000522638 302 ntBASIC4.91□□□□□ -1.62
CLPTM1O96005 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CLPTM1O96005 AC027544.3-201ENST00000535082 757 ntBASIC4.91□□□□□ -1.62
CLPTM1O96005 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.91□□□□□ -1.62
CLPTM1O96005 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.91□□□□□ -1.62
CLPTM1O96005 BNIP3P35-201ENST00000604530 490 ntBASIC4.91□□□□□ -1.62
CLPTM1O96005 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.91□□□□□ -1.62
CLPTM1O96005 AC109583.2-201ENST00000617367 129 ntBASIC4.91□□□□□ -1.62
CLPTM1O96005 AL390318.1-201ENST00000624564 687 ntBASIC4.91□□□□□ -1.62
CLPTM1O96005 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.91□□□□□ -1.62
CLPTM1O96005 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.91□□□□□ -1.62
CLPTM1O96005 OR13C1P-202ENST00000641378 2919 ntBASIC4.91□□□□□ -1.62
CLPTM1O96005 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLPTM1O96005 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.91□□□□□ -1.62
CLPTM1O96005 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CLPTM1O96005 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CLPTM1O96005 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLPTM1O96005 AC139713.2-215ENST00000641428 5037 ntBASIC4.91□□□□□ -1.62
CLPTM1O96005 AP000542.2-201ENST00000623199 6179 ntBASIC4.91□□□□□ -1.62
CLPTM1O96005 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.91□□□□□ -1.62
CLPTM1O96005 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.9□□□□□ -1.62
CLPTM1O96005 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CLPTM1O96005 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
CLPTM1O96005 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLPTM1O96005 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.9□□□□□ -1.62
CLPTM1O96005 DDX6P1-205ENST00000441966 1436 ntBASIC4.9□□□□□ -1.62
CLPTM1O96005 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.9□□□□□ -1.62
CLPTM1O96005 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLPTM1O96005 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CLPTM1O96005 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.9□□□□□ -1.62
CLPTM1O96005 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLPTM1O96005 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CLPTM1O96005 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLPTM1O96005 RNU6-697P-201ENST00000363348 107 ntBASIC4.9□□□□□ -1.63
CLPTM1O96005 SNORA17A-201ENST00000391185 133 ntBASIC4.9□□□□□ -1.63
CLPTM1O96005 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLPTM1O96005 AC098592.2-201ENST00000413158 265 ntBASIC4.9□□□□□ -1.63
CLPTM1O96005 RPL34P3-201ENST00000421454 338 ntBASIC4.9□□□□□ -1.63
CLPTM1O96005 NPM1P26-201ENST00000426339 738 ntBASIC4.9□□□□□ -1.63
CLPTM1O96005 AC023141.6-201ENST00000429418 337 ntBASIC4.9□□□□□ -1.63
CLPTM1O96005 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLPTM1O96005 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.9□□□□□ -1.63
CLPTM1O96005 RAB9AP5-201ENST00000437794 597 ntBASIC4.9□□□□□ -1.63
CLPTM1O96005 HMGB3P9-201ENST00000441799 583 ntBASIC4.9□□□□□ -1.63
CLPTM1O96005 RAB9AP2-201ENST00000443911 597 ntBASIC4.9□□□□□ -1.63
CLPTM1O96005 EEF1B2P6-201ENST00000445713 673 ntBASIC4.9□□□□□ -1.63
CLPTM1O96005 GXYLT1P1-201ENST00000446657 490 ntBASIC4.9□□□□□ -1.63
CLPTM1O96005 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLPTM1O96005 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLPTM1O96005 PTMAP3-201ENST00000447474 330 ntBASIC4.9□□□□□ -1.63
CLPTM1O96005 LRRC37A14P-201ENST00000452297 462 ntBASIC4.9□□□□□ -1.63
CLPTM1O96005 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.9□□□□□ -1.63
CLPTM1O96005 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.9□□□□□ -1.63
CLPTM1O96005 RN7SL809P-201ENST00000482040 297 ntBASIC4.9□□□□□ -1.63
CLPTM1O96005 AC104629.1-201ENST00000494226 508 ntBASIC4.9□□□□□ -1.63
CLPTM1O96005 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.9□□□□□ -1.63
CLPTM1O96005 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.9□□□□□ -1.63
CLPTM1O96005 RNU6-615P-201ENST00000516065 106 ntBASIC4.9□□□□□ -1.63
CLPTM1O96005 MRPS16P1-201ENST00000523462 412 ntBASIC4.9□□□□□ -1.63
CLPTM1O96005 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms