Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 DHX9P1-201ENST00000436565 3076 ntBASIC4.69□□□□□ -1.66
SCN2BO60939 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SCN2BO60939 AC009643.2-201ENST00000603543 1448 ntBASIC4.69□□□□□ -1.66
SCN2BO60939 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SCN2BO60939 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SCN2BO60939 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.69□□□□□ -1.66
SCN2BO60939 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SCN2BO60939 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SCN2BO60939 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SCN2BO60939 VPS35P1-201ENST00000563400 1518 ntBASIC4.68□□□□□ -1.66
SCN2BO60939 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SCN2BO60939 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SCN2BO60939 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SCN2BO60939 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SCN2BO60939 SNORA70.10-201ENST00000384515 134 ntBASIC4.68□□□□□ -1.66
SCN2BO60939 AP000534.2-201ENST00000412729 568 ntBASIC4.68□□□□□ -1.66
SCN2BO60939 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.68□□□□□ -1.66
SCN2BO60939 AC079355.1-201ENST00000421770 223 ntBASIC4.68□□□□□ -1.66
SCN2BO60939 EIF4HP2-201ENST00000424380 563 ntBASIC4.68□□□□□ -1.66
SCN2BO60939 RPS26P4-201ENST00000431743 355 ntBASIC4.68□□□□□ -1.66
SCN2BO60939 TMX2P1-201ENST00000436507 708 ntBASIC4.68□□□□□ -1.66
SCN2BO60939 NPM1P33-201ENST00000438918 872 ntBASIC4.68□□□□□ -1.66
SCN2BO60939 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SCN2BO60939 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.68□□□□□ -1.66
SCN2BO60939 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.68□□□□□ -1.66
SCN2BO60939 AP000942.1-201ENST00000463969 747 ntBASIC4.68□□□□□ -1.66
SCN2BO60939 RN7SL809P-201ENST00000482040 297 ntBASIC4.68□□□□□ -1.66
SCN2BO60939 AC020890.1-201ENST00000491837 504 ntBASIC4.68□□□□□ -1.66
SCN2BO60939 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
SCN2BO60939 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.68□□□□□ -1.66
SCN2BO60939 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SCN2BO60939 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SCN2BO60939 OR11J2P-201ENST00000555298 907 ntBASIC4.68□□□□□ -1.66
SCN2BO60939 AC007225.2-201ENST00000562529 256 ntBASIC4.68□□□□□ -1.66
SCN2BO60939 MIR6768-201ENST00000610734 72 ntBASIC4.68□□□□□ -1.66
SCN2BO60939 AL627230.1-201ENST00000613077 211 ntBASIC4.68□□□□□ -1.66
SCN2BO60939 AL049794.2-201ENST00000616301 365 ntBASIC4.68□□□□□ -1.66
SCN2BO60939 MIR8069-1-201ENST00000616627 86 ntBASIC4.68□□□□□ -1.66
SCN2BO60939 AL591926.8-201ENST00000616876 211 ntBASIC4.68□□□□□ -1.66
SCN2BO60939 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.68□□□□□ -1.66
SCN2BO60939 MIR8069-2-201ENST00000621412 86 ntBASIC4.68□□□□□ -1.66
SCN2BO60939 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SCN2BO60939 ECM1P2-201ENST00000503354 1577 ntBASIC4.68□□□□□ -1.66
SCN2BO60939 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SCN2BO60939 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SCN2BO60939 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SCN2BO60939 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SCN2BO60939 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SCN2BO60939 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
SCN2BO60939 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SCN2BO60939 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.67□□□□□ -1.66
SCN2BO60939 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SCN2BO60939 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SCN2BO60939 AC104118.1-201ENST00000607625 1589 ntBASIC4.67□□□□□ -1.66
SCN2BO60939 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.67□□□□□ -1.66
SCN2BO60939 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SCN2BO60939 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SCN2BO60939 AL391361.1-201ENST00000405580 489 ntBASIC4.67□□□□□ -1.66
SCN2BO60939 RN7SKP126-201ENST00000411143 300 ntBASIC4.67□□□□□ -1.66
SCN2BO60939 DDX39BP1-205ENST00000422507 192 ntBASIC4.67□□□□□ -1.66
SCN2BO60939 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SCN2BO60939 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.67□□□□□ -1.66
SCN2BO60939 OR7E125P-201ENST00000443450 846 ntBASIC4.67□□□□□ -1.66
SCN2BO60939 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.67□□□□□ -1.66
SCN2BO60939 RNA5SP43-201ENST00000516559 110 ntBASIC4.67□□□□□ -1.66
SCN2BO60939 RNA5SP392-201ENST00000516905 112 ntBASIC4.67□□□□□ -1.66
SCN2BO60939 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.67□□□□□ -1.66
SCN2BO60939 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SCN2BO60939 SULT1C2P2-201ENST00000562517 294 ntBASIC4.67□□□□□ -1.66
SCN2BO60939 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.67□□□□□ -1.66
SCN2BO60939 AC011447.4-201ENST00000587562 111 ntBASIC4.67□□□□□ -1.66
SCN2BO60939 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.67□□□□□ -1.66
SCN2BO60939 RNF138P2-201ENST00000603490 592 ntBASIC4.67□□□□□ -1.66
SCN2BO60939 AC087783.2-201ENST00000605070 562 ntBASIC4.67□□□□□ -1.66
SCN2BO60939 AL512329.2-201ENST00000607350 548 ntBASIC4.67□□□□□ -1.66
SCN2BO60939 AC097505.1-201ENST00000610199 565 ntBASIC4.67□□□□□ -1.66
SCN2BO60939 MIR6729-201ENST00000618194 65 ntBASIC4.67□□□□□ -1.66
SCN2BO60939 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.67□□□□□ -1.66
SCN2BO60939 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
SCN2BO60939 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.67□□□□□ -1.66
SCN2BO60939 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SCN2BO60939 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SCN2BO60939 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SCN2BO60939 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.67□□□□□ -1.66
SCN2BO60939 NXF4-202ENST00000416098 1465 ntBASIC4.67□□□□□ -1.66
SCN2BO60939 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SCN2BO60939 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SCN2BO60939 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.67□□□□□ -1.66
SCN2BO60939 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SCN2BO60939 MTCO1P11-201ENST00000429111 1528 ntBASIC4.67□□□□□ -1.66
SCN2BO60939 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.66□□□□□ -1.66
SCN2BO60939 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SCN2BO60939 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SCN2BO60939 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SCN2BO60939 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SCN2BO60939 CASC19-206ENST00000641028 1430 ntBASIC4.66□□□□□ -1.66
SCN2BO60939 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.66□□□□□ -1.66
SCN2BO60939 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SCN2BO60939 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SCN2BO60939 MIR1286-201ENST00000408112 78 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms