Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 RNA5SP187-201ENST00000384400 119 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 AL133270.1-201ENST00000402635 279 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 RPL35AP24-201ENST00000413846 330 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.72□□□□□ -1.65
LMX1BO60663 RPL23AP27-201ENST00000415161 451 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.72□□□□□ -1.65
LMX1BO60663 MTND4LP13-201ENST00000425022 298 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LMX1BO60663 RPL7L1P9-201ENST00000431298 745 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 RPS26P4-201ENST00000431743 355 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.72□□□□□ -1.65
LMX1BO60663 CNOT7P2-201ENST00000441051 832 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LMX1BO60663 AC090804.1-201ENST00000448870 490 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 RPL32P14-201ENST00000463196 378 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 AC005532.2-201ENST00000467154 373 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 RN7SL423P-201ENST00000486202 304 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 AC004453.1-201ENST00000487895 408 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.72□□□□□ -1.65
LMX1BO60663 AC021146.5-201ENST00000503544 545 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 AC069306.1-201ENST00000507006 843 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 AC119751.5-201ENST00000514077 770 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.72□□□□□ -1.65
LMX1BO60663 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.72□□□□□ -1.65
LMX1BO60663 EIF4A2P5-201ENST00000529914 499 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LMX1BO60663 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.72□□□□□ -1.65
LMX1BO60663 AGGF1P9-201ENST00000561884 913 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.72□□□□□ -1.65
LMX1BO60663 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.72□□□□□ -1.65
LMX1BO60663 MRPS21P7-201ENST00000566937 238 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.72□□□□□ -1.65
LMX1BO60663 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.72□□□□□ -1.65
LMX1BO60663 LSM1P2-201ENST00000604911 322 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 AC244107.2-201ENST00000611773 76 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 AC093783.1-201ENST00000612976 329 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 AL645927.2-201ENST00000618350 349 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 AC022079.1-201ENST00000621546 602 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 AP003476.1-201ENST00000623984 516 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 AC006963.1-201ENST00000624003 1052 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 AC120349.3-201ENST00000624377 529 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 AC099654.6-201ENST00000636487 512 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.72□□□□□ -1.65
LMX1BO60663 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.72□□□□□ -1.65
LMX1BO60663 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
LMX1BO60663 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
LMX1BO60663 AP001284.1-201ENST00000528393 2118 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.72□□□□□ -1.65
LMX1BO60663 AP000473.2-201ENST00000602659 1537 ntBASIC4.72□□□□□ -1.65
LMX1BO60663 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
LMX1BO60663 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.71□□□□□ -1.65
LMX1BO60663 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
LMX1BO60663 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.71□□□□□ -1.65
LMX1BO60663 CUL4AP1-201ENST00000514750 1863 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.71□□□□□ -1.66
LMX1BO60663 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LMX1BO60663 AL450345.1-202ENST00000605741 3881 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LMX1BO60663 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
LMX1BO60663 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LMX1BO60663 RNU4-27P-201ENST00000410889 139 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 TRIM60P17-201ENST00000415181 719 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LMX1BO60663 ARAFP1-201ENST00000422172 605 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 AC092634.2-201ENST00000428146 1010 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.71□□□□□ -1.66
LMX1BO60663 CETN4P-201ENST00000432407 469 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 RPL19P16-201ENST00000433839 588 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.71□□□□□ -1.66
LMX1BO60663 AL772161.1-201ENST00000439130 476 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.71□□□□□ -1.66
LMX1BO60663 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.71□□□□□ -1.66
LMX1BO60663 MTND1P33-201ENST00000446251 917 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
LMX1BO60663 OTX2P1-201ENST00000450956 354 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.71□□□□□ -1.66
LMX1BO60663 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 AC079841.1-201ENST00000481228 950 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 RPS4XP1-201ENST00000482189 787 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 AC090638.1-201ENST00000498296 909 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 MTCYBP35-201ENST00000503630 1137 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 BOLA3P3-201ENST00000505182 232 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 AC093720.1-201ENST00000505681 714 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.71□□□□□ -1.66
LMX1BO60663 AC121161.1-201ENST00000510606 652 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 AC109464.1-201ENST00000511091 819 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.71□□□□□ -1.66
LMX1BO60663 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.71□□□□□ -1.66
LMX1BO60663 NPM1P52-201ENST00000518264 846 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.71□□□□□ -1.66
LMX1BO60663 OR8G5-201ENST00000524943 1041 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 DUXAP5-201ENST00000529668 529 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.71□□□□□ -1.66
LMX1BO60663 GLRXP2-201ENST00000555594 321 ntBASIC4.71□□□□□ -1.66
LMX1BO60663 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.71□□□□□ -1.66
LMX1BO60663 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
LMX1BO60663 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LMX1BO60663 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LMX1BO60663 AC019322.1-201ENST00000571869 389 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms