Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM38O00635 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM38O00635 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM38O00635 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM38O00635 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM38O00635 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM38O00635 AC235565.1-201ENST00000456962 1325 ntBASIC5.69□□□□□ -1.5
TRIM38O00635 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
TRIM38O00635 SRRM1P3-201ENST00000426911 2678 ntBASIC5.69□□□□□ -1.5
TRIM38O00635 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM38O00635 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM38O00635 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.69□□□□□ -1.5
TRIM38O00635 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM38O00635 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM38O00635 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM38O00635 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
TRIM38O00635 MRE11P1-201ENST00000464884 2127 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM38O00635 YES1P1-201ENST00000418510 1628 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 HSPD1P14-201ENST00000432666 1618 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 SNORA58B-201ENST00000364259 136 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 RNU6-171P-201ENST00000384354 107 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 RN7SKP59-201ENST00000410520 314 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 DPPA2P3-201ENST00000411853 655 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM38O00635 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.68□□□□□ -1.5
TRIM38O00635 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM38O00635 MTCO3P4-201ENST00000419236 787 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 AC241520.1-201ENST00000422654 1099 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM38O00635 RPS7P2-201ENST00000435134 607 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 USP9YP28-201ENST00000435142 589 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 AL627308.1-201ENST00000435693 821 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TRIM38O00635 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.68□□□□□ -1.5
TRIM38O00635 AL390119.1-201ENST00000440329 312 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 RPS23P9-201ENST00000448848 438 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 AL603882.1-201ENST00000463059 681 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM38O00635 AL157777.1-201ENST00000468100 304 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 UBA52P7-201ENST00000486088 380 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM38O00635 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM38O00635 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM38O00635 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM38O00635 AC119751.5-201ENST00000514077 770 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM38O00635 MRPS16P1-201ENST00000523462 412 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 AP000859.1-201ENST00000525536 307 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.68□□□□□ -1.5
TRIM38O00635 OR4A43P-201ENST00000532938 908 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 AL121594.2-201ENST00000541658 472 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM38O00635 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.68□□□□□ -1.5
TRIM38O00635 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.68□□□□□ -1.5
TRIM38O00635 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM38O00635 AC090888.2-201ENST00000559765 1144 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 CD24P2-201ENST00000565486 219 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM38O00635 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.68□□□□□ -1.5
TRIM38O00635 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM38O00635 AC124016.2-201ENST00000610058 665 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 AC016769.4-201ENST00000616893 535 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 MTND2P41-201ENST00000637599 773 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 AC132825.7-201ENST00000638744 335 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 AC006927.2-201ENST00000639256 389 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM38O00635 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
TRIM38O00635 CCT8P1-201ENST00000413611 1657 ntBASIC5.68□□□□□ -1.5
TRIM38O00635 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM38O00635 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM38O00635 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM38O00635 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM38O00635 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
TRIM38O00635 AC017007.4-201ENST00000503353 1352 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TRIM38O00635 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM38O00635 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM38O00635 LINC02019-201ENST00000608605 2060 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
TRIM38O00635 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
TRIM38O00635 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TRIM38O00635 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM38O00635 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM38O00635 MIR122-201ENST00000385044 85 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.67□□□□□ -1.5
TRIM38O00635 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM38O00635 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM38O00635 PCNPP4-201ENST00000414817 517 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM38O00635 AC023128.2-201ENST00000420880 1223 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM38O00635 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM38O00635 AC007394.1-201ENST00000421941 531 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 AL365338.1-201ENST00000422282 858 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 PTP4A1P7-201ENST00000423476 514 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TRIM38O00635 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM38O00635 AP000936.3-201ENST00000438127 255 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms