Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRBV11-1A0A0K0K1C0 INTS6P1-201ENST00000504674 2530 ntBASIC4.69□□□□□ -1.66
TRBV11-1A0A0K0K1C0 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 RN7SKP104-201ENST00000362605 328 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 MIR550A3-201ENST00000390735 95 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AL109941.1-201ENST00000401925 229 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 SNORA77-201ENST00000408716 125 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 PCNPP4-201ENST00000414817 517 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AC079809.1-201ENST00000415468 276 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AC046176.1-201ENST00000435260 1170 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 PRPF38AP2-201ENST00000438179 851 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 OR7E125P-201ENST00000443450 846 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 TCEA1P1-201ENST00000449716 880 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 OR52E3P-201ENST00000452083 936 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 CBX1P2-201ENST00000453841 458 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 RN7SL319P-201ENST00000480656 221 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AC069304.1-201ENST00000491593 704 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 RN7SL591P-201ENST00000496150 292 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AC140172.1-201ENST00000502928 141 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AP001922.4-201ENST00000526967 290 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AC027369.5-201ENST00000533838 755 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AC011270.1-201ENST00000558606 583 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 FAM106CP-201ENST00000582212 507 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AC008833.1-201ENST00000611633 691 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AP001005.3-201ENST00000622049 129 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AC091932.2-201ENST00000623014 291 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AC021242.1-201ENST00000507315 2035 ntBASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
TRBV11-1A0A0K0K1C0 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 RN7SKP95-201ENST00000362860 303 ntBASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 SNORA51.8-201ENST00000384234 132 ntBASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 SNORA70.10-201ENST00000384515 134 ntBASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AL021331.1-201ENST00000402817 582 ntBASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AC233289.1-201ENST00000403700 508 ntBASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 CHEK2P3-201ENST00000416118 248 ntBASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 COX6CP13-201ENST00000428703 226 ntBASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 PA2G4P6-201ENST00000438325 1197 ntBASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AC004980.3-201ENST00000447046 365 ntBASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 HIGD1AP8-201ENST00000453927 274 ntBASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AL133244.1-201ENST00000456007 258 ntBASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 OR5AZ1P-201ENST00000527448 943 ntBASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AC011487.3-201ENST00000593607 453 ntBASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 OR7M1P-201ENST00000608946 533 ntBASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AL445528.2-201ENST00000620582 470 ntBASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AP000542.2-201ENST00000623199 6179 ntBASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV11-1A0A0K0K1C0 AC063976.2-201ENST00000425667 3556 ntBASIC4.66□□□□□ -1.66
TRBV11-1A0A0K0K1C0 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.66□□□□□ -1.66
TRBV11-1A0A0K0K1C0 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
TRBV11-1A0A0K0K1C0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.66□□□□□ -1.66
TRBV11-1A0A0K0K1C0 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRBV11-1A0A0K0K1C0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRBV11-1A0A0K0K1C0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms