Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 NACA3P-201ENST00000359690 648 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AL132875.1-201ENST00000403623 949 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 RPS7P8-201ENST00000418311 581 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 ELOCP9-201ENST00000418624 239 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 MFSD13B-201ENST00000420133 1290 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 BX284632.2-201ENST00000421091 399 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 REREP1Y-201ENST00000422655 198 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 VN1R110P-201ENST00000438988 971 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 REREP2Y-201ENST00000439103 200 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 SETD6P1-201ENST00000444575 317 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AL161636.2-201ENST00000445179 927 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 DNAJC19P8-201ENST00000452887 259 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 RPL23AP12-201ENST00000467573 473 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC073522.1-201ENST00000483312 377 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC118282.2-201ENST00000508739 374 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 RNA5SP438-201ENST00000516561 112 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 TMEM97P2-201ENST00000517841 403 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AP000648.1-201ENST00000529682 397 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 EIF4A2P5-201ENST00000529914 499 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 ZNF321P-202ENST00000550843 495 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AL121579.2-201ENST00000555466 590 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC009120.3-201ENST00000563335 499 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 MIR5708-201ENST00000579723 85 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AP005119.1-201ENST00000580956 292 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC005244.1-201ENST00000582566 339 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC015688.2-201ENST00000584523 262 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC068790.7-201ENST00000602347 528 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 MRPS35P3-201ENST00000603189 709 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AL031601.1-201ENST00000605702 394 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC022079.1-201ENST00000621546 602 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC112694.2-201ENST00000623697 768 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 MIR1322-201ENST00000638013 71 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 SAMMSON-209ENST00000641222 1100 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 MFSD8-245ENST00000641743 948 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC096656.1-201ENST00000623826 1364 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC004158.1-201ENST00000564508 4319 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC091305.2-201ENST00000624049 1576 ntBASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA3Q9Y5H0 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 AL034546.1-201ENST00000623740 3693 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 OR52B3P-201ENST00000314715 928 ntBASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PCDHGA3Q9Y5H0 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms