Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC138866.2-201ENST00000508650 584 ntBASIC5.77□□□□□ -1.49
DKK3Q9UBP4 SNORA43.3-201ENST00000517240 103 ntBASIC5.77□□□□□ -1.49
DKK3Q9UBP4 AC091163.3-201ENST00000518269 1144 ntBASIC5.77□□□□□ -1.49
DKK3Q9UBP4 BUD31P1-201ENST00000521828 359 ntBASIC5.77□□□□□ -1.49
DKK3Q9UBP4 AC136777.2-201ENST00000522979 358 ntBASIC5.77□□□□□ -1.49
DKK3Q9UBP4 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 AC104229.1-201ENST00000561364 255 ntBASIC5.77□□□□□ -1.49
DKK3Q9UBP4 AC010735.1-201ENST00000567305 1026 ntBASIC5.77□□□□□ -1.49
DKK3Q9UBP4 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 AC124856.1-201ENST00000600819 896 ntBASIC5.77□□□□□ -1.49
DKK3Q9UBP4 AC012213.4-201ENST00000606457 354 ntBASIC5.77□□□□□ -1.49
DKK3Q9UBP4 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 AC093673.2-201ENST00000609674 331 ntBASIC5.77□□□□□ -1.49
DKK3Q9UBP4 AC090607.5-201ENST00000615692 224 ntBASIC5.77□□□□□ -1.49
DKK3Q9UBP4 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 AC019080.5-201ENST00000624891 757 ntBASIC5.77□□□□□ -1.49
DKK3Q9UBP4 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 AP004607.3-201ENST00000530354 3915 ntBASIC5.77□□□□□ -1.49
DKK3Q9UBP4 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 AC133552.1-201ENST00000569988 4007 ntBASIC5.77□□□□□ -1.49
DKK3Q9UBP4 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 BTBD10P1-201ENST00000549824 1352 ntBASIC5.77□□□□□ -1.49
DKK3Q9UBP4 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 AL606537.1-201ENST00000607258 2011 ntBASIC5.77□□□□□ -1.49
DKK3Q9UBP4 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
DKK3Q9UBP4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 SNORA74A-201ENST00000364089 198 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 RNU6-729P-201ENST00000384399 107 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 AC136624.1-201ENST00000400791 413 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 NENFP1-201ENST00000419476 466 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 NIPA2P1-201ENST00000426223 976 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 BX119904.1-201ENST00000432026 348 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 RPL7P34-201ENST00000433316 712 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 FABP5P3-201ENST00000437960 408 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 AP000281.1-201ENST00000444036 316 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 AL589765.3-201ENST00000446084 462 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 CCRL1P1-201ENST00000449542 1053 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 RPS23P2-201ENST00000463671 415 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 AC107015.1-201ENST00000466902 747 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 RN7SL717P-201ENST00000478343 297 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 TPT1P3-201ENST00000492841 512 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 SNORA19.3-201ENST00000516165 130 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 MIR4505-201ENST00000582238 73 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 AC084373.1-201ENST00000603311 235 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 FAM72A-208ENST00000607379 1139 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 AC008115.4-201ENST00000619780 775 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 AC011330.2-201ENST00000621680 635 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 AP003485.2-201ENST00000623636 610 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 CU639417.4-201ENST00000623928 207 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 AC093591.2-201ENST00000565254 3843 ntBASIC5.76□□□□□ -1.49
DKK3Q9UBP4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
DKK3Q9UBP4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
DKK3Q9UBP4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms