Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 GCSHP4-201ENST00000538792 439 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 FKBP1BP1-201ENST00000553366 325 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 AC087477.6-201ENST00000559595 843 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 IMMP1LP1-201ENST00000605170 488 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 MIR6826-201ENST00000617808 98 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 AC015804.1-201ENST00000622935 435 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 AC020763.5-201ENST00000623298 430 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 AC009120.7-201ENST00000623452 780 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 AC020978.9-201ENST00000624380 1141 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 AP002371.2-201ENST00000624450 503 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 AL353662.3-201ENST00000625131 237 ntBASIC5.23□□□□□ -1.57
SIX2Q9NPC8 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SIX2Q9NPC8 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 SOCS5P3-201ENST00000425115 1576 ntBASIC5.22□□□□□ -1.57
SIX2Q9NPC8 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 Y_RNA.62-201ENST00000362840 99 ntBASIC5.22□□□□□ -1.57
SIX2Q9NPC8 RNU4-4P-201ENST00000364588 130 ntBASIC5.22□□□□□ -1.57
SIX2Q9NPC8 RN7SKP269-201ENST00000365545 319 ntBASIC5.22□□□□□ -1.57
SIX2Q9NPC8 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 AL592291.1-201ENST00000403830 352 ntBASIC5.22□□□□□ -1.57
SIX2Q9NPC8 AC007064.3-201ENST00000422608 359 ntBASIC5.22□□□□□ -1.57
SIX2Q9NPC8 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 MTCO3P43-201ENST00000440974 771 ntBASIC5.22□□□□□ -1.57
SIX2Q9NPC8 TDGF1P1-201ENST00000445734 527 ntBASIC5.22□□□□□ -1.57
SIX2Q9NPC8 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 TPT1P1-201ENST00000458495 518 ntBASIC5.22□□□□□ -1.57
SIX2Q9NPC8 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.22□□□□□ -1.57
SIX2Q9NPC8 OR8A2P-201ENST00000528631 952 ntBASIC5.22□□□□□ -1.57
SIX2Q9NPC8 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 HAUS8P1-201ENST00000549005 542 ntBASIC5.22□□□□□ -1.57
SIX2Q9NPC8 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 AC096586.2-201ENST00000610260 441 ntBASIC5.22□□□□□ -1.57
SIX2Q9NPC8 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 AC010266.2-201ENST00000564741 3255 ntBASIC5.22□□□□□ -1.57
SIX2Q9NPC8 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SIX2Q9NPC8 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.21□□□□□ -1.57
SIX2Q9NPC8 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
SIX2Q9NPC8 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 RN7SKP104-201ENST00000362605 328 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 AL021331.1-201ENST00000402817 582 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 AP000580.1-201ENST00000404439 358 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 AP002530.1-201ENST00000405705 684 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 MIR1271-201ENST00000408537 86 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 DPPA2P3-201ENST00000411853 655 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 VN1R37P-201ENST00000419096 748 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 AC013268.2-201ENST00000420753 337 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 RPL7P57-201ENST00000423238 740 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 AL590623.1-201ENST00000427864 105 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 RPL34P6-201ENST00000432390 345 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 NDUFA5P1-201ENST00000433858 341 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 AC073850.1-201ENST00000449243 255 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 AC004815.1-201ENST00000484185 331 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 AC109462.1-201ENST00000491087 368 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 AC140172.1-201ENST00000502928 141 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 AC138938.1-201ENST00000515431 782 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 RN7SKP66-201ENST00000516681 231 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 MTND1P36-201ENST00000522384 936 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 SNORA74C-1-201ENST00000580726 201 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 AC020910.3-201ENST00000603701 874 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SIX2Q9NPC8 AC022106.2-201ENST00000620114 757 ntBASIC5.21□□□□□ -1.58
SIX2Q9NPC8 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 155.3 ms