Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 AP001153.1-201ENST00000641024 338 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VTA1Q9NP79 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VTA1Q9NP79 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VTA1Q9NP79 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VTA1Q9NP79 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VTA1Q9NP79 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VTA1Q9NP79 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VTA1Q9NP79 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VTA1Q9NP79 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
VTA1Q9NP79 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 AL591135.1-201ENST00000401578 5914 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 CDC27P2-201ENST00000425026 1922 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VTA1Q9NP79 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VTA1Q9NP79 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VTA1Q9NP79 MIR937-201ENST00000401271 86 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 HMGB1P49-201ENST00000418882 569 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 AL139148.1-201ENST00000427122 680 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 NANOGP4-201ENST00000427230 913 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 AL365220.1-201ENST00000432923 399 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 OR6D1P-201ENST00000436165 939 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC073052.1-201ENST00000440417 714 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VTA1Q9NP79 TRY2P-201ENST00000448860 689 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC005532.2-201ENST00000467154 373 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 CDH12P2-201ENST00000504393 298 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC113420.1-201ENST00000507903 571 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC021106.1-201ENST00000509020 1058 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 TOMM22P4-201ENST00000511318 336 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC023050.2-201ENST00000544968 387 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 AGGF1P7-201ENST00000562369 913 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 MTND3P13-201ENST00000574391 343 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC005412.1-201ENST00000580812 1049 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 AP002884.5-201ENST00000595053 1132 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC079395.3-201ENST00000615161 484 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 MIR7155-201ENST00000615925 56 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC021755.4-201ENST00000616620 456 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 FRG1HP-204ENST00000617940 757 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 AL355493.4-201ENST00000618530 292 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC006386.1-201ENST00000619436 415 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 AP002782.1-201ENST00000623107 614 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC120349.3-201ENST00000624377 529 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VTA1Q9NP79 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VTA1Q9NP79 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VTA1Q9NP79 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VTA1Q9NP79 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
VTA1Q9NP79 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VTA1Q9NP79 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VTA1Q9NP79 AC020656.2-201ENST00000613291 5309 ntBASIC6.35□□□□□ -1.39
VTA1Q9NP79 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.34□□□□□ -1.39
VTA1Q9NP79 AC007938.2-201ENST00000604666 2634 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
VTA1Q9NP79 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
VTA1Q9NP79 AL161912.4-201ENST00000623889 2468 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.34□□□□□ -1.39
VTA1Q9NP79 RNA5SP27-201ENST00000363839 119 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 MIR551A-201ENST00000385042 96 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 RN7SKP97-201ENST00000410966 333 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 AC010385.1-201ENST00000412374 256 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 RPS24P7-201ENST00000416921 246 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 AC234781.4-201ENST00000419384 244 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 AC005005.2-201ENST00000420779 380 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 CYCSP6-201ENST00000434498 302 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 OR51B8P-201ENST00000449892 769 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 MEMO1P4-201ENST00000453590 386 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms