Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 AC015720.2-201ENST00000567709 334 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 AC009852.2-201ENST00000567898 485 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 MIR4509-3-201ENST00000578671 94 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 MIR4509-2-201ENST00000583920 94 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 AC098935.2-201ENST00000604222 466 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 MIR4509-1-201ENST00000618224 94 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 AL390318.1-201ENST00000624564 687 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 AC073869.8-201ENST00000641806 335 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 SEPT7P7-201ENST00000420492 1301 ntBASIC5.66□□□□□ -1.5
USP29Q9HBJ7 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.66□□□□□ -1.5
USP29Q9HBJ7 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 AC092376.2-201ENST00000622621 4116 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 AL442128.2-201ENST00000620246 1824 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 RNU6-796P-201ENST00000391086 107 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 RNU4-34P-201ENST00000410431 124 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 AL121878.1-201ENST00000418638 859 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 DSTNP5-201ENST00000427921 523 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 AL160175.1-201ENST00000428124 247 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 ELOCP13-201ENST00000443934 329 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 AL450023.1-201ENST00000450868 751 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 ASNSP4-201ENST00000511103 447 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 SCARNA20.4-201ENST00000516969 131 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 OR8G5-201ENST00000524943 1041 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 AP001804.2-201ENST00000533932 910 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 LSM3P2-201ENST00000551246 273 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 OR11H3P-201ENST00000554547 982 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 MTCO2P2-201ENST00000591258 225 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 AC008536.1-201ENST00000602872 669 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 IMMP1LP3-201ENST00000604197 224 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 AC073137.1-201ENST00000605636 634 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 AC009974.1-201ENST00000608881 455 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 RNU6-1192P-201ENST00000612197 107 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 RNU6-489P-201ENST00000618289 107 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 MIR6837-201ENST00000620884 64 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 AC135068.5-201ENST00000624197 983 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 AC136428.4-201ENST00000634254 1155 ntBASIC5.65□□□□□ -1.5
USP29Q9HBJ7 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
USP29Q9HBJ7 YES1P1-201ENST00000418510 1628 ntBASIC5.65□□□□□ -1.51
USP29Q9HBJ7 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.51
USP29Q9HBJ7 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
USP29Q9HBJ7 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
USP29Q9HBJ7 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
USP29Q9HBJ7 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.51
USP29Q9HBJ7 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.65□□□□□ -1.51
USP29Q9HBJ7 AL603750.1-201ENST00000624216 1717 ntBASIC5.65□□□□□ -1.51
USP29Q9HBJ7 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 AC132825.1-201ENST00000463573 2247 ntBASIC5.64□□□□□ -1.51
USP29Q9HBJ7 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 RNU6-468P-201ENST00000384003 109 ntBASIC5.64□□□□□ -1.51
USP29Q9HBJ7 ANAPC10P1-201ENST00000395991 556 ntBASIC5.64□□□□□ -1.51
USP29Q9HBJ7 MIR1286-201ENST00000408112 78 ntBASIC5.64□□□□□ -1.51
USP29Q9HBJ7 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms