Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 SNORA73.1-201ENST00000363107 205 ntBASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 MIR223-201ENST00000385204 110 ntBASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 MTND4LP13-201ENST00000425022 298 ntBASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 NANOGP4-201ENST00000427230 913 ntBASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 NPM1P22-201ENST00000427761 952 ntBASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 BTG3P1-201ENST00000435859 716 ntBASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 RAB28P3-201ENST00000448325 597 ntBASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 AC092647.2-201ENST00000452998 253 ntBASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 AC016724.1-201ENST00000453215 421 ntBASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 TPT1P1-201ENST00000458495 518 ntBASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 GYG1P1-201ENST00000460864 698 ntBASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 AC037198.2-201ENST00000478845 733 ntBASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 AC072052.1-201ENST00000496556 306 ntBASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 AC012339.2-201ENST00000523996 453 ntBASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 NMNAT1P1-201ENST00000554095 876 ntBASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 SETP1-201ENST00000556014 845 ntBASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 MIR3176-201ENST00000582210 90 ntBASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 AC011447.4-201ENST00000587562 111 ntBASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 AC004808.2-201ENST00000627965 773 ntBASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LRRC40Q9H9A6 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
LRRC40Q9H9A6 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.09□□□□□ -1.6
LRRC40Q9H9A6 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.09□□□□□ -1.6
LRRC40Q9H9A6 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
LRRC40Q9H9A6 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.09□□□□□ -1.6
LRRC40Q9H9A6 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 AC068446.1-201ENST00000556425 1549 ntBASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 SNORA70.10-201ENST00000384515 134 ntBASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 SNORA66-201ENST00000384792 133 ntBASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 AC079355.1-201ENST00000421770 223 ntBASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 AC022431.1-201ENST00000450941 438 ntBASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 IGHV5-78-201ENST00000450948 295 ntBASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 RPS17P2-201ENST00000461663 408 ntBASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 AC022336.1-201ENST00000475510 337 ntBASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 AC079841.1-201ENST00000481228 950 ntBASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 RN7SL30P-201ENST00000488416 306 ntBASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 SNRPCP2-201ENST00000504370 475 ntBASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 SULT1C2P2-201ENST00000562517 294 ntBASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 AP005901.4-201ENST00000577336 569 ntBASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 AC105254.2-201ENST00000603636 436 ntBASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 AC022467.1-201ENST00000614738 749 ntBASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 AC105105.5-201ENST00000622635 1294 ntBASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
LRRC40Q9H9A6 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 AL672167.1-204ENST00000641875 3017 ntBASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 AP000542.2-201ENST00000623199 6179 ntBASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 MIR365B-201ENST00000362317 111 ntBASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 U3.36-201ENST00000408418 213 ntBASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 SNORA11.3-201ENST00000408471 128 ntBASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC40Q9H9A6 ARAFP1-201ENST00000422172 605 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms