Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.55□□□□□ -1.52
CCSER1Q9C0I3 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.55□□□□□ -1.52
CCSER1Q9C0I3 DUX4L52-201ENST00000549363 777 ntBASIC5.55□□□□□ -1.52
CCSER1Q9C0I3 AP005901.4-201ENST00000577336 569 ntBASIC5.55□□□□□ -1.52
CCSER1Q9C0I3 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.55□□□□□ -1.52
CCSER1Q9C0I3 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.55□□□□□ -1.52
CCSER1Q9C0I3 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.55□□□□□ -1.52
CCSER1Q9C0I3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.55□□□□□ -1.52
CCSER1Q9C0I3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCSER1Q9C0I3 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCSER1Q9C0I3 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 AL672167.1-204ENST00000641875 3017 ntBASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 RNA5SP345-201ENST00000410646 108 ntBASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 AF186996.5-201ENST00000418098 904 ntBASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 AC090142.2-201ENST00000483263 416 ntBASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 AP000926.3-201ENST00000497201 299 ntBASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 AC231760.1-201ENST00000498002 260 ntBASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 AC113398.2-201ENST00000507630 558 ntBASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 RNA5SP392-201ENST00000516905 112 ntBASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 Y_RNA.719-201ENST00000517156 106 ntBASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 AP000859.1-201ENST00000525536 307 ntBASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 AC068993.1-201ENST00000546724 589 ntBASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 AC009852.2-201ENST00000567898 485 ntBASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 ADAM3B-201ENST00000569937 840 ntBASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 BX323046.1-201ENST00000610145 535 ntBASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 AC009643.2-201ENST00000603543 1448 ntBASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCSER1Q9C0I3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 AL022393.1-201ENST00000625142 1677 ntBASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 THAP12P5-201ENST00000405864 2275 ntBASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 SNORA74A-201ENST00000364089 198 ntBASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 AL109941.1-201ENST00000401925 229 ntBASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 AC092162.1-201ENST00000432828 434 ntBASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 PSMD10P3-201ENST00000437000 448 ntBASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 AL137845.2-201ENST00000444292 988 ntBASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 RN7SL319P-201ENST00000480656 221 ntBASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 AC093270.2-201ENST00000486157 792 ntBASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 RPL37AP8-201ENST00000494116 276 ntBASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 MRPS33P2-201ENST00000507850 322 ntBASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 RNA5SP249-201ENST00000516127 99 ntBASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 SNORD116-30-201ENST00000516468 85 ntBASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 RN7SKP66-201ENST00000516681 231 ntBASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 AL121839.1-201ENST00000556233 1185 ntBASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 AL353662.3-201ENST00000625131 237 ntBASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 AC000374.1-201ENST00000434698 1745 ntBASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 MTCO1P15-201ENST00000529569 1526 ntBASIC5.53□□□□□ -1.52
CCSER1Q9C0I3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 SYT14P1-202ENST00000600441 1448 ntBASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 AL357515.1-201ENST00000402967 542 ntBASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 VN1R54P-201ENST00000435210 1049 ntBASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.52□□□□□ -1.53
CCSER1Q9C0I3 RPL7P11-201ENST00000437586 658 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms