Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNU1-106P-201ENST00000384382 164 ntBASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 CHMP1B2P-201ENST00000399581 597 ntBASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 COX6CP17-201ENST00000421389 185 ntBASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 AL136455.1-201ENST00000441083 1240 ntBASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 AC097484.1-201ENST00000471148 389 ntBASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 AC090686.1-201ENST00000481577 749 ntBASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 CYCSP40-201ENST00000575927 294 ntBASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 AC087283.1-201ENST00000604029 1074 ntBASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 uc_338.18-201ENST00000615451 175 ntBASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 AC091953.3-201ENST00000623220 236 ntBASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 CASC19-281ENST00000642118 1554 ntBASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 SALL4P2-201ENST00000423288 2910 ntBASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 SNORA66-201ENST00000384792 133 ntBASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 CYB5AP4-201ENST00000396692 399 ntBASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 NDUFA5P9-201ENST00000472609 340 ntBASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 AC090114.3-201ENST00000479267 829 ntBASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 RAB9BP1-201ENST00000519581 626 ntBASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 AC005377.1-201ENST00000605126 456 ntBASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 MIR7641-1-201ENST00000627518 61 ntBASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 NXF4-202ENST00000416098 1465 ntBASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 ECM1P2-201ENST00000503354 1577 ntBASIC5.88□□□□□ -1.47
UPF3BQ9BZI7 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 AL022322.2-201ENST00000624072 20397 ntBASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 RNA5SP455-201ENST00000365190 119 ntBASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 AL357515.1-201ENST00000402967 542 ntBASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 U3.36-201ENST00000408418 213 ntBASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 AC092647.3-201ENST00000443044 633 ntBASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 RN7SL385P-201ENST00000468873 276 ntBASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 AC068587.1-201ENST00000483613 781 ntBASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 RNA5SP249-201ENST00000516127 99 ntBASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 RNA5SP303-201ENST00000516192 130 ntBASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 AC013701.1-201ENST00000522657 465 ntBASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 AC137768.1-201ENST00000549998 553 ntBASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 MIR4472-2-201ENST00000582069 67 ntBASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 MIR4691-201ENST00000583764 85 ntBASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 AL049794.2-201ENST00000616301 365 ntBASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
UPF3BQ9BZI7 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 STX3-208ENST00000641815 3236 ntBASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms