Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 DEFA9P-201ENST00000433042 285 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 LINC00328-2P-201ENST00000436585 219 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 MTCO3P11-201ENST00000455103 774 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 CDC42P1-201ENST00000456658 548 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 CREM-242ENST00000490511 469 ntTSL 2 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 RPL9P6-201ENST00000492764 598 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 RPL19P11-201ENST00000495944 589 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AL358832.1-201ENST00000497800 389 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AC093664.1-201ENST00000511779 289 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 RNU6-875P-201ENST00000516488 106 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AC013701.1-201ENST00000522657 465 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 CENPUP1-201ENST00000526649 1202 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AC124947.2-202ENST00000552735 133 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AC026956.1-201ENST00000558741 396 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AL138976.2-201ENST00000563989 694 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AC011891.2-201ENST00000604949 397 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AC004836.1-201ENST00000623032 634 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AC018692.2-201ENST00000624130 348 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 SNX18P10-201ENST00000625014 519 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 FER-210ENST00000628534 558 ntTSL 5 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 MIR3688-2-201ENST00000636963 87 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AL022323.4-201ENST00000623980 13120 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 CASC19-206ENST00000641028 1430 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AC017104.4-201ENST00000636283 1592 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AC023245.2-201ENST00000530760 2978 ntBASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.46□□□□□ -1.54
SSBP3Q9BWW4 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 TEX21P-201ENST00000447107 1476 ntBASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 AC119674.1-202ENST00000641333 1860 ntBASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 RNU1-84P-201ENST00000365447 164 ntBASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 Y_RNA.453-201ENST00000384223 109 ntBASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 MT-TD-201ENST00000387419 68 ntBASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 Y_RNA.582-201ENST00000391023 95 ntBASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 RNU6-876P-201ENST00000391295 104 ntBASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 AC003045.1-201ENST00000398779 713 ntBASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 AC099535.1-201ENST00000408928 371 ntBASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 HMGB3P31-201ENST00000413333 595 ntBASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 MTCYBP24-201ENST00000420387 1106 ntBASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 AC233728.2-201ENST00000425348 757 ntBASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 AL035458.1-201ENST00000433096 585 ntBASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 BTF3P10-201ENST00000433415 495 ntBASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 AC092427.1-201ENST00000439177 601 ntBASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 AC002542.1-201ENST00000440683 193 ntBASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.45□□□□□ -1.54
SSBP3Q9BWW4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms