Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC94Q9BW85 RN7SKP104-201ENST00000362605 328 ntBASIC5.71□□□□□ -1.5
CCDC94Q9BW85 U3.3-201ENST00000362986 216 ntBASIC5.71□□□□□ -1.5
CCDC94Q9BW85 AL121834.1-202ENST00000404494 277 ntBASIC5.71□□□□□ -1.5
CCDC94Q9BW85 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CCDC94Q9BW85 AL161722.2-201ENST00000434731 981 ntBASIC5.71□□□□□ -1.5
CCDC94Q9BW85 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC94Q9BW85 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC94Q9BW85 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC94Q9BW85 AF186190.1-201ENST00000517470 480 ntBASIC5.71□□□□□ -1.5
CCDC94Q9BW85 AC134349.2-201ENST00000535136 910 ntBASIC5.71□□□□□ -1.5
CCDC94Q9BW85 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
CCDC94Q9BW85 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC94Q9BW85 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC94Q9BW85 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC94Q9BW85 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC94Q9BW85 AC018552.1-201ENST00000562099 811 ntBASIC5.71□□□□□ -1.5
CCDC94Q9BW85 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC94Q9BW85 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC94Q9BW85 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC94Q9BW85 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.71□□□□□ -1.5
CCDC94Q9BW85 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC94Q9BW85 AC099494.2-201ENST00000623371 978 ntBASIC5.71□□□□□ -1.5
CCDC94Q9BW85 TLK1P1-201ENST00000456760 2440 ntBASIC5.71□□□□□ -1.5
CCDC94Q9BW85 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC94Q9BW85 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CCDC94Q9BW85 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC94Q9BW85 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CCDC94Q9BW85 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.71□□□□□ -1.5
CCDC94Q9BW85 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC94Q9BW85 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC94Q9BW85 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC94Q9BW85 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC94Q9BW85 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CCDC94Q9BW85 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
CCDC94Q9BW85 NUDT19P3-201ENST00000404698 555 ntBASIC5.7□□□□□ -1.5
CCDC94Q9BW85 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.7□□□□□ -1.5
CCDC94Q9BW85 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC94Q9BW85 GTF2IP2-201ENST00000424290 697 ntBASIC5.7□□□□□ -1.5
CCDC94Q9BW85 FABP7P2-201ENST00000429946 379 ntBASIC5.7□□□□□ -1.5
CCDC94Q9BW85 AC090018.1-201ENST00000434369 367 ntBASIC5.7□□□□□ -1.5
CCDC94Q9BW85 CLUHP1-201ENST00000435012 1190 ntBASIC5.7□□□□□ -1.5
CCDC94Q9BW85 RPS29P10-201ENST00000439197 166 ntBASIC5.7□□□□□ -1.5
CCDC94Q9BW85 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC94Q9BW85 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC94Q9BW85 CEACAMP7-201ENST00000444105 496 ntBASIC5.7□□□□□ -1.5
CCDC94Q9BW85 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC94Q9BW85 AC108751.2-201ENST00000469993 231 ntBASIC5.7□□□□□ -1.5
CCDC94Q9BW85 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC94Q9BW85 AC093827.1-201ENST00000480094 861 ntBASIC5.7□□□□□ -1.5
CCDC94Q9BW85 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC94Q9BW85 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC94Q9BW85 OR4A46P-201ENST00000527255 933 ntBASIC5.7□□□□□ -1.5
CCDC94Q9BW85 HNRNPRP2-201ENST00000528421 743 ntBASIC5.7□□□□□ -1.5
CCDC94Q9BW85 EIF4A2P5-201ENST00000529914 499 ntBASIC5.7□□□□□ -1.5
CCDC94Q9BW85 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC94Q9BW85 AC006116.3-201ENST00000592968 361 ntBASIC5.7□□□□□ -1.5
CCDC94Q9BW85 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC94Q9BW85 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC94Q9BW85 AL162431.4-201ENST00000604674 411 ntBASIC5.7□□□□□ -1.5
CCDC94Q9BW85 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC94Q9BW85 MIR7155-201ENST00000615925 56 ntBASIC5.7□□□□□ -1.5
CCDC94Q9BW85 AC131238.1-201ENST00000617135 328 ntBASIC5.7□□□□□ -1.5
CCDC94Q9BW85 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC94Q9BW85 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC94Q9BW85 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CCDC94Q9BW85 AC093909.5-201ENST00000621839 1799 ntBASIC5.7□□□□□ -1.5
CCDC94Q9BW85 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC94Q9BW85 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC94Q9BW85 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC94Q9BW85 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC94Q9BW85 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC94Q9BW85 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC94Q9BW85 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC94Q9BW85 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC94Q9BW85 AC092111.2-201ENST00000611627 1414 ntBASIC5.69□□□□□ -1.5
CCDC94Q9BW85 OR9G4-201ENST00000302957 984 ntBASIC5.69□□□□□ -1.5
CCDC94Q9BW85 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CCDC94Q9BW85 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC94Q9BW85 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC94Q9BW85 RNU1-106P-201ENST00000384382 164 ntBASIC5.69□□□□□ -1.5
CCDC94Q9BW85 RPS4XP16-201ENST00000427198 791 ntBASIC5.69□□□□□ -1.5
CCDC94Q9BW85 HSPE1P27-201ENST00000430808 296 ntBASIC5.69□□□□□ -1.5
CCDC94Q9BW85 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC94Q9BW85 DNAJB5P1-201ENST00000454004 806 ntBASIC5.69□□□□□ -1.5
CCDC94Q9BW85 AC109462.1-201ENST00000491087 368 ntBASIC5.69□□□□□ -1.5
CCDC94Q9BW85 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC94Q9BW85 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC94Q9BW85 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC94Q9BW85 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC94Q9BW85 AC006427.1-201ENST00000514359 712 ntBASIC5.69□□□□□ -1.5
CCDC94Q9BW85 RN7SKP66-201ENST00000516681 231 ntBASIC5.69□□□□□ -1.5
CCDC94Q9BW85 AC092490.3-201ENST00000545370 572 ntBASIC5.69□□□□□ -1.5
CCDC94Q9BW85 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC94Q9BW85 GLRXP2-201ENST00000555594 321 ntBASIC5.69□□□□□ -1.5
CCDC94Q9BW85 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC94Q9BW85 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC94Q9BW85 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC94Q9BW85 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC94Q9BW85 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms