Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 AC005034.3-201ENST00000604845 1747 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 FUNDC2P3-201ENST00000334716 533 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 AL391419.1-201ENST00000398901 1275 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 MTND4LP17-201ENST00000414607 293 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 RPL23AP39-201ENST00000415533 405 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 AL139184.1-202ENST00000422303 222 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 AC083862.1-201ENST00000427378 1242 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 AP001324.1-201ENST00000428553 399 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 RPS25P9-201ENST00000435591 252 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 TMX2P1-201ENST00000436507 708 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 AC091862.1-201ENST00000438016 1100 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 AC093155.1-201ENST00000440164 826 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 AL592447.1-201ENST00000447592 540 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 SSXP1-201ENST00000453640 473 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 RN7SL39P-201ENST00000462264 297 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 RPS7P6-201ENST00000485777 579 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 AC018645.1-201ENST00000505003 109 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 RPL7L1P4-201ENST00000513004 707 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 RNU6-416P-201ENST00000516265 103 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 AC135983.3-201ENST00000528049 1226 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 NPIPB14P-203ENST00000532298 987 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 LINC02495-203ENST00000636704 242 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 AC119674.1-212ENST00000641155 993 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 LINC01739-205ENST00000641890 573 ntBASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.09□□□□□ -1.44
PTCHD1Q96NR3 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PTCHD1Q96NR3 Z99496.1-201ENST00000469424 1477 ntBASIC6.09□□□□□ -1.44
PTCHD1Q96NR3 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 PDZK1P1-202ENST00000425209 1350 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 HSPD1P16-201ENST00000402302 394 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 PIGPP2-201ENST00000411569 458 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AL050321.1-201ENST00000432363 400 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 RPL5P10-201ENST00000445207 894 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 RPL23AP35-201ENST00000451906 501 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AL606490.1-201ENST00000452266 765 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 HCG17-214ENST00000453558 732 ntTSL 5 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 RPS4XP12-201ENST00000461747 709 ntBASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.08□□□□□ -1.44
PTCHD1Q96NR3 AC098818.1-201ENST00000478593 252 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms