Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 AC234772.1-201ENST00000377927 937 ntBASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 RNU6-1005P-201ENST00000384519 107 ntBASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 RNU1-77P-201ENST00000390868 162 ntBASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 ATF1P1-201ENST00000406040 927 ntBASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 SNORA79B-201ENST00000410557 148 ntBASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 AL445183.3-201ENST00000414168 502 ntBASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 BMS1P17-202ENST00000416720 316 ntBASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 CFL1P1-202ENST00000432948 411 ntBASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 ARAFP2-201ENST00000440565 559 ntBASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 AC092106.1-201ENST00000444291 373 ntBASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 AL161722.1-201ENST00000446972 1032 ntBASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 VDAC2P4-201ENST00000452925 711 ntBASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 RPS4XP14-201ENST00000493072 781 ntBASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 AC013701.1-201ENST00000522657 465 ntBASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 OR5AM1P-201ENST00000532136 1032 ntBASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 MTND1P8-201ENST00000571424 950 ntBASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 AC011492.1-201ENST00000600023 315 ntBASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 AC112503.1-201ENST00000608436 391 ntBASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CHMP4CQ96CF2 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.59□□□□□ -1.36
CHMP4CQ96CF2 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AL031595.2-201ENST00000624215 19071 ntBASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AC019072.1-201ENST00000604535 1551 ntBASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 U3.28-201ENST00000391249 210 ntBASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 MIR1178-201ENST00000408396 91 ntBASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 RN7SKP293-201ENST00000411389 296 ntBASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 RPSAP35-201ENST00000413753 818 ntBASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 BX510359.3-201ENST00000422168 306 ntBASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AC241520.1-201ENST00000422654 1099 ntBASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 PTP4A1P7-201ENST00000423476 514 ntBASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AL136231.1-201ENST00000429407 730 ntBASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AL035458.1-201ENST00000433096 585 ntBASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AC108729.1-201ENST00000487812 947 ntBASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 PRELID3BP6-201ENST00000503839 571 ntBASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 HAUS1P1-201ENST00000505275 832 ntBASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 SNORA31.13-201ENST00000516624 135 ntBASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 RN7SKP99-201ENST00000517028 307 ntBASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AC106754.1-201ENST00000562632 1513 ntBASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.58□□□□□ -1.36
CHMP4CQ96CF2 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms