Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTP4A1Q93096 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTP4A1Q93096 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 AL034549.2-201ENST00000618285 3373 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTP4A1Q93096 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTP4A1Q93096 RNA5SP394-201ENST00000364216 119 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 UBBP2-201ENST00000376781 231 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 HMGB1P20-201ENST00000402555 677 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 HMGB1P13-201ENST00000406019 642 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 RPL31P52-201ENST00000407532 367 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 RMRPP5-201ENST00000411156 267 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 COX5BP7-201ENST00000414780 274 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 RPS3P2-201ENST00000421346 701 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 AC127526.2-201ENST00000426436 775 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTP4A1Q93096 FO393419.3-201ENST00000428741 282 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 AC002069.1-201ENST00000429649 1159 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 RPL19P16-201ENST00000433839 588 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 AC007000.2-201ENST00000442564 487 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 AC005297.1-201ENST00000444765 862 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 RPL31P44-201ENST00000447680 377 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 IFNWP4-201ENST00000453148 294 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTP4A1Q93096 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 RNU6-615P-201ENST00000516065 106 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 CDC42P3-201ENST00000518493 633 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 IGKV2-4-201ENST00000523070 340 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 NMNAT1P5-201ENST00000559657 841 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 AC084757.1-201ENST00000559987 490 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 AC015802.2-201ENST00000589690 189 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 AL355802.4-201ENST00000607635 548 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 AC244107.2-201ENST00000611773 76 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTP4A1Q93096 AC025016.1-201ENST00000616746 682 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 AC009704.2-201ENST00000618739 483 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 AC010435.1-201ENST00000623353 1177 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 AL138820.1-201ENST00000617901 5305 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTP4A1Q93096 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTP4A1Q93096 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTP4A1Q93096 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTP4A1Q93096 MTND4P31-201ENST00000425607 1343 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTP4A1Q93096 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 GTF2H2B-203ENST00000508065 1432 ntBASIC4.88□□□□□ -1.63
PTP4A1Q93096 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTP4A1Q93096 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTP4A1Q93096 AL731532.2-201ENST00000623542 1953 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 AL360270.2-201ENST00000562952 5985 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTP4A1Q93096 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTP4A1Q93096 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTP4A1Q93096 RNA5SP510-201ENST00000364697 99 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 RN7SKP6-201ENST00000364795 319 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTP4A1Q93096 TAF9BP2-201ENST00000400856 499 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 OR2AT2P-201ENST00000413438 905 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 IPPKP1-201ENST00000422501 768 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 AL035458.1-201ENST00000433096 585 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 RPS15AP29-201ENST00000445539 400 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 AL450996.1-201ENST00000445574 1202 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 MTND2P25-201ENST00000449028 610 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 AL450023.1-201ENST00000450868 751 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTP4A1Q93096 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 RPL15P21-201ENST00000495592 567 ntBASIC4.87□□□□□ -1.63
PTP4A1Q93096 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.87□□□□□ -1.63
PTP4A1Q93096 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms