Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 ECM1P2-201ENST00000503354 1577 ntBASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AL672167.1-203ENST00000641299 2975 ntBASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AC000123.3-201ENST00000624029 4975 ntBASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AC092435.4-201ENST00000623012 4159 ntBASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 RNU6-729P-201ENST00000384399 107 ntBASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 SNORA66-201ENST00000384792 133 ntBASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 E2F6P2-201ENST00000420708 748 ntBASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 FABP7P1-201ENST00000424004 391 ntBASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AC106901.1-201ENST00000425086 698 ntBASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AC090142.2-201ENST00000483263 416 ntBASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 Y_RNA.719-201ENST00000517156 106 ntBASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AC026688.1-201ENST00000520639 1168 ntBASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AC025423.2-201ENST00000537570 439 ntBASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AC090022.1-201ENST00000546569 311 ntBASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AC008521.2-201ENST00000591021 259 ntBASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AC104695.2-201ENST00000605056 775 ntBASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AL008729.2-201ENST00000606393 473 ntBASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AC109309.2-201ENST00000612597 332 ntBASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AC005840.5-201ENST00000619166 599 ntBASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AF117829.2-201ENST00000619538 361 ntBASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AC012414.7-202ENST00000622705 1090 ntBASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.87□□□□□ -1.63
NUDCD3Q8IVD9 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 U3.35-201ENST00000408405 208 ntBASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 RPL23AP19-201ENST00000436229 369 ntBASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 AL354714.3-201ENST00000447284 493 ntBASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 TCEA1P1-201ENST00000449716 880 ntBASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 NPM1P39-201ENST00000449818 867 ntBASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 AC107015.1-201ENST00000466902 747 ntBASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 RN7SKP34-201ENST00000516142 244 ntBASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 AC024940.3-201ENST00000538551 316 ntBASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 AC022404.1-201ENST00000555320 273 ntBASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 AC084759.1-201ENST00000561168 290 ntBASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 SNORA35B-201ENST00000607417 129 ntBASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 AC015982.1-201ENST00000608113 465 ntBASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 AC090527.3-201ENST00000619041 548 ntBASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 AP001005.3-201ENST00000622049 129 ntBASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 AC015804.1-201ENST00000622935 435 ntBASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NUDCD3Q8IVD9 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms