Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 MTND4LP14-201ENST00000429447 288 ntBASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 LINC00328-2P-201ENST00000436585 219 ntBASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 GYG1P1-201ENST00000460864 698 ntBASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 RNU6-362P-201ENST00000516736 90 ntBASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 WBP1LP3-201ENST00000523033 208 ntBASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 AP003033.2-201ENST00000528901 805 ntBASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 BTG1P1-201ENST00000540396 508 ntBASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 AC121758.1-202ENST00000556917 658 ntBASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 MIR548Y-201ENST00000582739 110 ntBASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 MIR4260-201ENST00000583107 67 ntBASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 AC011500.1-201ENST00000601963 469 ntBASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 AL135999.3-201ENST00000610501 812 ntBASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 AC025016.1-201ENST00000616746 682 ntBASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 AC073869.8-201ENST00000641806 335 ntBASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
KCNIP4Q6PIL6 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 SELENOWP1-201ENST00000322792 252 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 SNORD51.1-201ENST00000365405 77 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 AL009179.1-201ENST00000406085 265 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 AL138785.1-201ENST00000425821 331 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 RPS24P8-201ENST00000431490 402 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 MED6P1-201ENST00000439659 713 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 RPS15AP29-201ENST00000445539 400 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 RPL34P26-201ENST00000445636 354 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 BTF3P6-201ENST00000448054 499 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 OR52A4P-201ENST00000472867 958 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 AC025181.1-201ENST00000477507 416 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 ZNF519P4-201ENST00000514008 125 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 CR383658.1-201ENST00000514609 734 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 AC027369.2-201ENST00000528030 440 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 HMGB3P26-201ENST00000560051 582 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 MIR744-201ENST00000578242 98 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 AC233280.2-201ENST00000603917 1070 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 AC109583.2-201ENST00000617367 129 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 AP004607.9-201ENST00000618202 316 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 MIR6813-201ENST00000621638 56 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 AP006248.2-201ENST00000623309 592 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 AP003072.4-201ENST00000624580 310 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 AC129915.3-201ENST00000634128 948 ntBASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KCNIP4Q6PIL6 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms