Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC022106.2-201ENST00000620114 757 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.82□□□□□ -1.64
SCN1BQ07699 AC129915.3-201ENST00000634128 948 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 AC073869.10-201ENST00000642016 354 ntBASIC4.82□□□□□ -1.64
SCN1BQ07699 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SCN1BQ07699 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SCN1BQ07699 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SCN1BQ07699 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SCN1BQ07699 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.82□□□□□ -1.64
SCN1BQ07699 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SCN1BQ07699 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SCN1BQ07699 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN1BQ07699 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN1BQ07699 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.81□□□□□ -1.64
SCN1BQ07699 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN1BQ07699 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.81□□□□□ -1.64
SCN1BQ07699 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN1BQ07699 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN1BQ07699 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SCN1BQ07699 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN1BQ07699 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN1BQ07699 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN1BQ07699 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN1BQ07699 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN1BQ07699 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SCN1BQ07699 RNU4-44P-201ENST00000363050 141 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN1BQ07699 AC004386.1-201ENST00000393214 761 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SCN1BQ07699 NIFKP3-201ENST00000417799 865 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SCN1BQ07699 AC012519.1-201ENST00000424588 610 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 OR2AH1P-201ENST00000425717 928 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 AL390879.2-203ENST00000426943 1121 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 AC115283.1-201ENST00000427353 400 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.81□□□□□ -1.64
SCN1BQ07699 NDUFS5P5-201ENST00000437256 321 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.81□□□□□ -1.64
SCN1BQ07699 RPL7L1P1-201ENST00000448259 785 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 MTND2P8-201ENST00000450555 1025 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.81□□□□□ -1.64
SCN1BQ07699 AC110749.1-201ENST00000462007 357 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.81□□□□□ -1.64
SCN1BQ07699 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.81□□□□□ -1.64
SCN1BQ07699 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN1BQ07699 MTND3P24-201ENST00000506306 329 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 AC114781.3-201ENST00000512083 142 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.81□□□□□ -1.64
SCN1BQ07699 AC138938.1-201ENST00000515431 782 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 RNA5SP438-201ENST00000516561 112 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.81□□□□□ -1.64
SCN1BQ07699 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.81□□□□□ -1.64
SCN1BQ07699 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.81□□□□□ -1.64
SCN1BQ07699 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN1BQ07699 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.81□□□□□ -1.64
SCN1BQ07699 AC025260.1-201ENST00000548858 430 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.81□□□□□ -1.64
SCN1BQ07699 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.81□□□□□ -1.64
SCN1BQ07699 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.81□□□□□ -1.64
SCN1BQ07699 AL356801.1-201ENST00000559320 294 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 AC096996.1-201ENST00000563813 325 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.81□□□□□ -1.64
SCN1BQ07699 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN1BQ07699 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.81□□□□□ -1.64
SCN1BQ07699 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.81□□□□□ -1.64
SCN1BQ07699 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN1BQ07699 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN1BQ07699 U6.48-201ENST00000618523 106 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 AC015871.5-202ENST00000623252 701 ntBASIC4.81□□□□□ -1.64
SCN1BQ07699 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.81□□□□□ -1.64
SCN1BQ07699 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
SCN1BQ07699 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.81□□□□□ -1.64
SCN1BQ07699 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN1BQ07699 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SCN1BQ07699 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN1BQ07699 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN1BQ07699 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SCN1BQ07699 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SCN1BQ07699 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN1BQ07699 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.81□□□□□ -1.64
SCN1BQ07699 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN1BQ07699 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN1BQ07699 SCN1A-220ENST00000641603 12506 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 AC114546.3-201ENST00000623582 1734 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN1BQ07699 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN1BQ07699 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN1BQ07699 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN1BQ07699 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN1BQ07699 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SCN1BQ07699 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN1BQ07699 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN1BQ07699 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SCN1BQ07699 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SCN1BQ07699 AC024341.1-201ENST00000526444 1552 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SCN1BQ07699 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms