Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 RNU4-40P-201ENST00000364351 143 ntBASIC6.04□□□□□ -1.44
CDC42EP1Q00587 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 LYPLA1P1-201ENST00000434514 622 ntBASIC6.04□□□□□ -1.44
CDC42EP1Q00587 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 AC110749.1-201ENST00000462007 357 ntBASIC6.04□□□□□ -1.44
CDC42EP1Q00587 RN7SL799P-201ENST00000475891 298 ntBASIC6.04□□□□□ -1.44
CDC42EP1Q00587 AC079841.1-201ENST00000481228 950 ntBASIC6.04□□□□□ -1.44
CDC42EP1Q00587 OR11I1P-201ENST00000486033 954 ntBASIC6.04□□□□□ -1.44
CDC42EP1Q00587 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 PGAM1P13-201ENST00000507497 754 ntBASIC6.04□□□□□ -1.44
CDC42EP1Q00587 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 RNU6-1308P-201ENST00000516817 103 ntBASIC6.04□□□□□ -1.44
CDC42EP1Q00587 HMGB1P40-201ENST00000525121 540 ntBASIC6.04□□□□□ -1.44
CDC42EP1Q00587 HAUS8P1-201ENST00000549005 542 ntBASIC6.04□□□□□ -1.44
CDC42EP1Q00587 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 AC016180.1-201ENST00000567945 403 ntBASIC6.04□□□□□ -1.44
CDC42EP1Q00587 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 AC231759.1-201ENST00000616455 597 ntBASIC6.04□□□□□ -1.44
CDC42EP1Q00587 AC021755.4-201ENST00000616620 456 ntBASIC6.04□□□□□ -1.44
CDC42EP1Q00587 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CDC42EP1Q00587 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 ZNF658B-201ENST00000602828 3408 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 ZNF849P-201ENST00000594711 1566 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 AC233289.1-201ENST00000403700 508 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 RNA5SP487-201ENST00000410186 122 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 RPL22P18-201ENST00000417197 377 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 SRSF1P1-201ENST00000424058 520 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 FAM96AP1-201ENST00000430879 482 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 TRY2P-201ENST00000448860 689 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 ZNF886P-201ENST00000450781 723 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 RPS17P5-201ENST00000498293 408 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 AC108120.2-201ENST00000512973 294 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 AL049870.4-201ENST00000555741 486 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 AC005341.1-201ENST00000571086 708 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 BNIP3P24-201ENST00000593398 557 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 AC114878.2-201ENST00000604863 1251 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 AC211433.2-201ENST00000608433 387 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 AC139713.2-210ENST00000641741 992 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 MTND5P23-201ENST00000430812 1655 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 MTCO1P15-201ENST00000529569 1526 ntBASIC6.03□□□□□ -1.44
CDC42EP1Q00587 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.03□□□□□ -1.44
CDC42EP1Q00587 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms