Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.48□□□□□ -1.69
CX3CL1P78423 AC091057.3-201ENST00000602684 733 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 AC096947.1-201ENST00000603233 470 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 OR7A19P-201ENST00000608051 733 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 RNU6-1192P-201ENST00000612197 107 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 RNU6-489P-201ENST00000618289 107 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 AC073569.3-201ENST00000619055 682 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 AC084824.4-201ENST00000620106 731 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 AC073342.3-201ENST00000624211 193 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 OR4G3P-201ENST00000633500 913 ntBASIC4.48□□□□□ -1.69
CX3CL1P78423 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.48□□□□□ -1.69
CX3CL1P78423 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.48□□□□□ -1.69
CX3CL1P78423 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CX3CL1P78423 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.48□□□□□ -1.69
CX3CL1P78423 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CX3CL1P78423 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CL1P78423 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CL1P78423 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CX3CL1P78423 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.48□□□□□ -1.69
CX3CL1P78423 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.48□□□□□ -1.69
CX3CL1P78423 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CL1P78423 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.48□□□□□ -1.69
CX3CL1P78423 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.48□□□□□ -1.69
CX3CL1P78423 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CL1P78423 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CL1P78423 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.47□□□□□ -1.69
CX3CL1P78423 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CL1P78423 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CL1P78423 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.47□□□□□ -1.69
CX3CL1P78423 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
CX3CL1P78423 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CL1P78423 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.47□□□□□ -1.69
CX3CL1P78423 AC097461.1-201ENST00000568928 2821 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.47□□□□□ -1.69
CX3CL1P78423 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CL1P78423 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CL1P78423 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CX3CL1P78423 RNA5SP326-201ENST00000363209 110 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 RNA5SP27-201ENST00000363839 119 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.47□□□□□ -1.69
CX3CL1P78423 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CX3CL1P78423 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CX3CL1P78423 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CX3CL1P78423 AC005042.1-201ENST00000393397 800 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CL1P78423 AC233289.1-201ENST00000403700 508 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.47□□□□□ -1.69
CX3CL1P78423 PTP4A1P7-201ENST00000423476 514 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 AC115285.1-201ENST00000424879 736 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.47□□□□□ -1.69
CX3CL1P78423 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.47□□□□□ -1.69
CX3CL1P78423 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.47□□□□□ -1.69
CX3CL1P78423 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.47□□□□□ -1.69
CX3CL1P78423 AC005297.1-201ENST00000444765 862 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.47□□□□□ -1.69
CX3CL1P78423 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.47□□□□□ -1.69
CX3CL1P78423 AC022431.1-201ENST00000450941 438 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.47□□□□□ -1.69
CX3CL1P78423 ATP5LP5-201ENST00000483050 299 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.47□□□□□ -1.69
CX3CL1P78423 AC008427.1-201ENST00000503102 655 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 PRELID3BP6-201ENST00000503839 571 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.47□□□□□ -1.69
CX3CL1P78423 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.47□□□□□ -1.69
CX3CL1P78423 SUMO2P5-201ENST00000506790 245 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CL1P78423 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 IGLV3-24-201ENST00000517477 197 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CL1P78423 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.47□□□□□ -1.69
CX3CL1P78423 IGKV2D-10-201ENST00000520194 281 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 PMS2P3-207ENST00000529061 717 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.47□□□□□ -1.69
CX3CL1P78423 MIR4789-201ENST00000577469 82 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.47□□□□□ -1.69
CX3CL1P78423 MIR4311-201ENST00000580794 100 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.47□□□□□ -1.69
CX3CL1P78423 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.47□□□□□ -1.69
CX3CL1P78423 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.47□□□□□ -1.69
CX3CL1P78423 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.47□□□□□ -1.69
CX3CL1P78423 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.47□□□□□ -1.69
CX3CL1P78423 AC027243.2-201ENST00000602530 724 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 AL121652.1-201ENST00000608851 448 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 AC090912.3-201ENST00000609775 533 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.47□□□□□ -1.69
CX3CL1P78423 FRG1HP-204ENST00000617940 757 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 MIR6861-201ENST00000618657 64 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CX3CL1P78423 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CL1P78423 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.47□□□□□ -1.69
CX3CL1P78423 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CX3CL1P78423 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CL1P78423 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.47□□□□□ -1.69
CX3CL1P78423 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CL1P78423 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
CX3CL1P78423 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CL1P78423 OR4F13P-202ENST00000560066 2054 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.47□□□□□ -1.69
CX3CL1P78423 SRRM1P3-201ENST00000426911 2678 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 AC104964.3-201ENST00000606115 2860 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms