Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RN7SL189P-201ENST00000468631 289 ntBASIC4.84□□□□□ -1.63
CLDN6P56747 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.84□□□□□ -1.63
CLDN6P56747 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.84□□□□□ -1.63
CLDN6P56747 AC006427.1-201ENST00000514359 712 ntBASIC4.84□□□□□ -1.63
CLDN6P56747 AC009643.1-201ENST00000532030 391 ntBASIC4.84□□□□□ -1.63
CLDN6P56747 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.84□□□□□ -1.63
CLDN6P56747 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.84□□□□□ -1.63
CLDN6P56747 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.63
CLDN6P56747 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLDN6P56747 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.84□□□□□ -1.63
CLDN6P56747 MIR4277-201ENST00000578298 84 ntBASIC4.84□□□□□ -1.63
CLDN6P56747 MIR4284-201ENST00000578924 81 ntBASIC4.84□□□□□ -1.63
CLDN6P56747 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.84□□□□□ -1.63
CLDN6P56747 MIR7853-201ENST00000584820 132 ntBASIC4.84□□□□□ -1.63
CLDN6P56747 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.84□□□□□ -1.63
CLDN6P56747 AL512782.1-201ENST00000603093 364 ntBASIC4.84□□□□□ -1.63
CLDN6P56747 AC020910.3-201ENST00000603701 874 ntBASIC4.84□□□□□ -1.63
CLDN6P56747 AC011453.2-201ENST00000603737 729 ntBASIC4.84□□□□□ -1.63
CLDN6P56747 BNIP3P35-201ENST00000604530 490 ntBASIC4.84□□□□□ -1.63
CLDN6P56747 AL391358.1-201ENST00000605342 190 ntBASIC4.84□□□□□ -1.63
CLDN6P56747 AC245389.2-201ENST00000616023 576 ntBASIC4.84□□□□□ -1.63
CLDN6P56747 AC242843.1-201ENST00000618702 573 ntBASIC4.84□□□□□ -1.63
CLDN6P56747 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.84□□□□□ -1.63
CLDN6P56747 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLDN6P56747 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLDN6P56747 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
CLDN6P56747 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLDN6P56747 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLDN6P56747 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLDN6P56747 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLDN6P56747 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN6P56747 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.83□□□□□ -1.64
CLDN6P56747 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.83□□□□□ -1.64
CLDN6P56747 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.83□□□□□ -1.64
CLDN6P56747 AL513548.1-201ENST00000562904 1724 ntBASIC4.83□□□□□ -1.64
CLDN6P56747 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CLDN6P56747 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN6P56747 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN6P56747 CR382285.2-201ENST00000624662 1495 ntBASIC4.83□□□□□ -1.64
CLDN6P56747 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.83□□□□□ -1.64
CLDN6P56747 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.83□□□□□ -1.64
CLDN6P56747 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN6P56747 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN6P56747 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN6P56747 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.83□□□□□ -1.64
CLDN6P56747 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.83□□□□□ -1.64
CLDN6P56747 MIR589-201ENST00000385238 99 ntBASIC4.83□□□□□ -1.64
CLDN6P56747 RN7SKP100-201ENST00000411258 284 ntBASIC4.83□□□□□ -1.64
CLDN6P56747 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN6P56747 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.83□□□□□ -1.64
CLDN6P56747 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CLDN6P56747 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.83□□□□□ -1.64
CLDN6P56747 CEACAMP6-201ENST00000452007 574 ntBASIC4.83□□□□□ -1.64
CLDN6P56747 TAAR4P-201ENST00000454843 1039 ntBASIC4.83□□□□□ -1.64
CLDN6P56747 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.83□□□□□ -1.64
CLDN6P56747 RN7SKP276-201ENST00000516242 268 ntBASIC4.83□□□□□ -1.64
CLDN6P56747 RN7SKP92-201ENST00000517266 244 ntBASIC4.83□□□□□ -1.64
CLDN6P56747 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.83□□□□□ -1.64
CLDN6P56747 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
CLDN6P56747 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.83□□□□□ -1.64
CLDN6P56747 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.83□□□□□ -1.64
CLDN6P56747 AL020997.2-201ENST00000602607 184 ntBASIC4.83□□□□□ -1.64
CLDN6P56747 AL451049.1-201ENST00000608672 497 ntBASIC4.83□□□□□ -1.64
CLDN6P56747 AC091932.2-201ENST00000623014 291 ntBASIC4.83□□□□□ -1.64
CLDN6P56747 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN6P56747 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN6P56747 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
CLDN6P56747 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN6P56747 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CLDN6P56747 AC139713.2-214ENST00000642059 1811 ntBASIC4.83□□□□□ -1.64
CLDN6P56747 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN6P56747 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN6P56747 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN6P56747 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN6P56747 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN6P56747 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN6P56747 AL590240.1-201ENST00000334118 313 ntBASIC4.82□□□□□ -1.64
CLDN6P56747 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN6P56747 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLDN6P56747 HMGB3P7-201ENST00000400214 611 ntBASIC4.82□□□□□ -1.64
CLDN6P56747 AL589994.1-201ENST00000404962 340 ntBASIC4.82□□□□□ -1.64
CLDN6P56747 SMC4P1-201ENST00000414479 527 ntBASIC4.82□□□□□ -1.64
CLDN6P56747 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN6P56747 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN6P56747 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN6P56747 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN6P56747 AC007559.1-201ENST00000428736 355 ntBASIC4.82□□□□□ -1.64
CLDN6P56747 AL136231.1-201ENST00000429407 730 ntBASIC4.82□□□□□ -1.64
CLDN6P56747 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN6P56747 RBMY2TP-201ENST00000451162 947 ntBASIC4.82□□□□□ -1.64
CLDN6P56747 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN6P56747 AC010326.1-201ENST00000462726 602 ntBASIC4.82□□□□□ -1.64
CLDN6P56747 RN7SL443P-201ENST00000464331 290 ntBASIC4.82□□□□□ -1.64
CLDN6P56747 AC091153.1-201ENST00000466297 402 ntBASIC4.82□□□□□ -1.64
CLDN6P56747 NPM1P28-201ENST00000492269 840 ntBASIC4.82□□□□□ -1.64
CLDN6P56747 AC083829.1-201ENST00000503756 657 ntBASIC4.82□□□□□ -1.64
CLDN6P56747 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN6P56747 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.82□□□□□ -1.64
CLDN6P56747 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.82□□□□□ -1.64
CLDN6P56747 OR5M2P-201ENST00000529003 936 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms