Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.36□□□□□ -1.55
NR1H2P55055 AC021193.1-201ENST00000511607 420 ntBASIC5.36□□□□□ -1.55
NR1H2P55055 MTCO3P27-201ENST00000514397 196 ntBASIC5.36□□□□□ -1.55
NR1H2P55055 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.36□□□□□ -1.55
NR1H2P55055 SNORD46.2-201ENST00000516021 102 ntBASIC5.36□□□□□ -1.55
NR1H2P55055 Y_RNA.710-201ENST00000516975 110 ntBASIC5.36□□□□□ -1.55
NR1H2P55055 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.36□□□□□ -1.55
NR1H2P55055 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.36□□□□□ -1.55
NR1H2P55055 AC027544.3-201ENST00000535082 757 ntBASIC5.36□□□□□ -1.55
NR1H2P55055 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.36□□□□□ -1.55
NR1H2P55055 AC087894.1-201ENST00000538359 518 ntBASIC5.36□□□□□ -1.55
NR1H2P55055 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.36□□□□□ -1.55
NR1H2P55055 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.36□□□□□ -1.55
NR1H2P55055 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.36□□□□□ -1.55
NR1H2P55055 AC027243.2-201ENST00000602530 724 ntBASIC5.36□□□□□ -1.55
NR1H2P55055 AC125494.3-201ENST00000602759 455 ntBASIC5.36□□□□□ -1.55
NR1H2P55055 AC109309.2-201ENST00000612597 332 ntBASIC5.36□□□□□ -1.55
NR1H2P55055 uc_338.26-201ENST00000612659 160 ntBASIC5.36□□□□□ -1.55
NR1H2P55055 AC116447.1-201ENST00000613153 453 ntBASIC5.36□□□□□ -1.55
NR1H2P55055 U6.48-201ENST00000618523 106 ntBASIC5.36□□□□□ -1.55
NR1H2P55055 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.36□□□□□ -1.55
NR1H2P55055 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.36□□□□□ -1.55
NR1H2P55055 SNORA17.5-201ENST00000630429 132 ntBASIC5.36□□□□□ -1.55
NR1H2P55055 AC129915.3-201ENST00000634128 948 ntBASIC5.36□□□□□ -1.55
NR1H2P55055 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.36□□□□□ -1.55
NR1H2P55055 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NR1H2P55055 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NR1H2P55055 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NR1H2P55055 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.36□□□□□ -1.55
NR1H2P55055 AL132640.2-201ENST00000559968 1698 ntBASIC5.36□□□□□ -1.55
NR1H2P55055 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NR1H2P55055 AC090017.1-201ENST00000548612 1779 ntBASIC5.36□□□□□ -1.55
NR1H2P55055 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.36□□□□□ -1.55
NR1H2P55055 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
NR1H2P55055 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.36□□□□□ -1.55
NR1H2P55055 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NR1H2P55055 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
NR1H2P55055 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NR1H2P55055 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.36□□□□□ -1.55
NR1H2P55055 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
NR1H2P55055 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NR1H2P55055 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.35□□□□□ -1.55
NR1H2P55055 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NR1H2P55055 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.35□□□□□ -1.55
NR1H2P55055 VN2R3P-201ENST00000422626 1412 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 AC017007.4-201ENST00000503353 1352 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NR1H2P55055 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NR1H2P55055 RNU6-468P-201ENST00000384003 109 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 RNU6-178P-201ENST00000384631 104 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 AC093719.1-202ENST00000392735 373 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.35□□□□□ -1.55
NR1H2P55055 VN1R37P-201ENST00000419096 748 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.35□□□□□ -1.55
NR1H2P55055 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.35□□□□□ -1.55
NR1H2P55055 AC099336.2-201ENST00000422457 254 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.35□□□□□ -1.55
NR1H2P55055 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.35□□□□□ -1.55
NR1H2P55055 ELOCP10-201ENST00000440624 327 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 AC005077.1-201ENST00000449226 375 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 AC099560.2-201ENST00000457554 255 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 NXT1P1-201ENST00000458481 316 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 PPIAP19-201ENST00000486414 492 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.35□□□□□ -1.55
NR1H2P55055 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.35□□□□□ -1.55
NR1H2P55055 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.35□□□□□ -1.55
NR1H2P55055 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.35□□□□□ -1.55
NR1H2P55055 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.35□□□□□ -1.55
NR1H2P55055 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.35□□□□□ -1.55
NR1H2P55055 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NR1H2P55055 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.35□□□□□ -1.55
NR1H2P55055 AP005262.1-201ENST00000582646 997 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.35□□□□□ -1.55
NR1H2P55055 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.35□□□□□ -1.55
NR1H2P55055 BNIP3P40-201ENST00000596017 556 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NR1H2P55055 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
NR1H2P55055 AC068768.2-201ENST00000602352 343 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 ELOCP34-201ENST00000604436 327 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 AP000864.1-201ENST00000609424 650 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 STMN1P1-201ENST00000617809 440 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 FRG1HP-204ENST00000617940 757 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
NR1H2P55055 AC073569.3-201ENST00000619055 682 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 AC015726.3-201ENST00000624501 418 ntBASIC5.35□□□□□ -1.55
NR1H2P55055 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.35□□□□□ -1.55
NR1H2P55055 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NR1H2P55055 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NR1H2P55055 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NR1H2P55055 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.35□□□□□ -1.55
NR1H2P55055 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NR1H2P55055 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NR1H2P55055 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
NR1H2P55055 AC008627.1-201ENST00000517511 1704 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NR1H2P55055 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.34□□□□□ -1.55
NR1H2P55055 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NR1H2P55055 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NR1H2P55055 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms