Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.11□□□□□ -1.59
LIMK2P53671 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LIMK2P53671 GTF2F2P1-201ENST00000511083 675 ntBASIC5.11□□□□□ -1.59
LIMK2P53671 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.11□□□□□ -1.59
LIMK2P53671 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.11□□□□□ -1.59
LIMK2P53671 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.11□□□□□ -1.59
LIMK2P53671 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.11□□□□□ -1.59
LIMK2P53671 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.11□□□□□ -1.59
LIMK2P53671 AL512310.9-201ENST00000553311 948 ntBASIC5.11□□□□□ -1.59
LIMK2P53671 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LIMK2P53671 OR1F2P-201ENST00000570470 933 ntBASIC5.11□□□□□ -1.59
LIMK2P53671 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.11□□□□□ -1.59
LIMK2P53671 FAM60CP-201ENST00000591086 664 ntBASIC5.11□□□□□ -1.59
LIMK2P53671 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.11□□□□□ -1.59
LIMK2P53671 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
LIMK2P53671 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
LIMK2P53671 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.11□□□□□ -1.59
LIMK2P53671 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
LIMK2P53671 AC011447.7-201ENST00000624228 1590 ntBASIC5.11□□□□□ -1.59
LIMK2P53671 CASC19-281ENST00000642118 1554 ntBASIC5.11□□□□□ -1.59
LIMK2P53671 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.11□□□□□ -1.59
LIMK2P53671 AC025574.1-201ENST00000554784 1653 ntBASIC5.11□□□□□ -1.59
LIMK2P53671 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.11□□□□□ -1.59
LIMK2P53671 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.11□□□□□ -1.59
LIMK2P53671 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LIMK2P53671 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.1□□□□□ -1.59
LIMK2P53671 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
LIMK2P53671 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
LIMK2P53671 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK2P53671 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK2P53671 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.1□□□□□ -1.59
LIMK2P53671 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK2P53671 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK2P53671 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK2P53671 RNU4-4P-201ENST00000364588 130 ntBASIC5.1□□□□□ -1.59
LIMK2P53671 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.1□□□□□ -1.59
LIMK2P53671 CHMP1B2P-201ENST00000399581 597 ntBASIC5.1□□□□□ -1.59
LIMK2P53671 MIR1182-201ENST00000408363 97 ntBASIC5.1□□□□□ -1.59
LIMK2P53671 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LIMK2P53671 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.1□□□□□ -1.59
LIMK2P53671 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.1□□□□□ -1.59
LIMK2P53671 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.1□□□□□ -1.59
LIMK2P53671 AC013429.2-201ENST00000418798 781 ntBASIC5.1□□□□□ -1.59
LIMK2P53671 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK2P53671 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.1□□□□□ -1.59
LIMK2P53671 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK2P53671 AC012497.1-201ENST00000429392 575 ntBASIC5.1□□□□□ -1.59
LIMK2P53671 AC000374.1-201ENST00000434698 1745 ntBASIC5.1□□□□□ -1.59
LIMK2P53671 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.1□□□□□ -1.59
LIMK2P53671 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.1□□□□□ -1.59
LIMK2P53671 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.1□□□□□ -1.59
LIMK2P53671 RN7SL441P-201ENST00000492388 296 ntBASIC5.1□□□□□ -1.59
LIMK2P53671 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK2P53671 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.1□□□□□ -1.59
LIMK2P53671 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.1□□□□□ -1.59
LIMK2P53671 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.1□□□□□ -1.59
LIMK2P53671 AC134349.2-201ENST00000535136 910 ntBASIC5.1□□□□□ -1.59
LIMK2P53671 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK2P53671 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.1□□□□□ -1.59
LIMK2P53671 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK2P53671 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK2P53671 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK2P53671 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK2P53671 NDUFB4P11-201ENST00000560510 395 ntBASIC5.1□□□□□ -1.59
LIMK2P53671 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.1□□□□□ -1.59
LIMK2P53671 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.1□□□□□ -1.59
LIMK2P53671 MIR3908-201ENST00000579798 126 ntBASIC5.1□□□□□ -1.59
LIMK2P53671 MIR4436B2-201ENST00000581415 91 ntBASIC5.1□□□□□ -1.59
LIMK2P53671 MIR4436B1-201ENST00000583272 91 ntBASIC5.1□□□□□ -1.59
LIMK2P53671 AC067838.1-201ENST00000606064 577 ntBASIC5.1□□□□□ -1.59
LIMK2P53671 AL590410.1-201ENST00000617925 333 ntBASIC5.1□□□□□ -1.59
LIMK2P53671 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LIMK2P53671 AL672167.1-204ENST00000641875 3017 ntBASIC5.1□□□□□ -1.59
LIMK2P53671 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.1□□□□□ -1.59
LIMK2P53671 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK2P53671 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.09□□□□□ -1.59
LIMK2P53671 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LIMK2P53671 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
LIMK2P53671 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
LIMK2P53671 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.09□□□□□ -1.59
LIMK2P53671 AL022393.1-201ENST00000625142 1677 ntBASIC5.09□□□□□ -1.59
LIMK2P53671 PANDAR-201ENST00000629595 1506 ntBASIC5.09□□□□□ -1.59
LIMK2P53671 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.09□□□□□ -1.59
LIMK2P53671 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.09□□□□□ -1.59
LIMK2P53671 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
LIMK2P53671 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.09□□□□□ -1.59
LIMK2P53671 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LIMK2P53671 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LIMK2P53671 SNORA2.3-201ENST00000383920 135 ntBASIC5.09□□□□□ -1.59
LIMK2P53671 AC013442.1-201ENST00000397347 228 ntBASIC5.09□□□□□ -1.59
LIMK2P53671 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.09□□□□□ -1.59
LIMK2P53671 AL139128.1-201ENST00000413921 941 ntBASIC5.09□□□□□ -1.59
LIMK2P53671 RPS26P13-201ENST00000419030 330 ntBASIC5.09□□□□□ -1.59
LIMK2P53671 AC234781.4-201ENST00000419384 244 ntBASIC5.09□□□□□ -1.59
LIMK2P53671 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.09□□□□□ -1.59
LIMK2P53671 FTLP19-201ENST00000433300 394 ntBASIC5.09□□□□□ -1.59
LIMK2P53671 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.09□□□□□ -1.59
LIMK2P53671 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.09□□□□□ -1.59
LIMK2P53671 XKRYP6-201ENST00000440468 1116 ntBASIC5.09□□□□□ -1.59
LIMK2P53671 XKRYP3-201ENST00000442113 1116 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms